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GOStat analysis of Biological Processes that are significantly enriched in the set of 3478 genes found with the AB platform. Of those genes only 2476 had recognizable HUGO symbols and 1811 were annotated in the GO database. Shown here is a subset of 20 representative significant GO annotations. The complete set of 135 significant GO categories together with the identities of the genes in each category is included in the supplementary data. |
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| GO Number |
GO Category |
Observed Genes |
Total Genes |
p-value |
|
|
||||
| GO:0007155 |
cell adhesion |
129 |
859 |
2.96E-18 |
| GO:0009611 |
response to wounding |
70 |
429 |
9.63E-12 |
| GO:0008283 |
cell proliferation |
78 |
526 |
2.69E-10 |
| GO:0006954 |
inflammatory response |
43 |
225 |
2.80E-10 |
| GO:0009613 |
response to pathogen |
79 |
542 |
3.94E-10 |
| GO:0007154 |
cell communication |
447 |
4919 |
1.89E-09 |
| GO:0006950 |
response to stress |
137 |
1164 |
3.90E-09 |
| GO:0009653 |
morphogenesis |
145 |
1307 |
1.12E-07 |
| GO:0006928 |
cell motility |
35 |
211 |
4.47E-06 |
| GO:0006935 |
chemotaxis |
24 |
124 |
7.56E-06 |
| GO:0009887 |
organogenesis |
112 |
1026 |
1.40E-05 |
| GO:0005578 |
extracellular matrix |
58 |
453 |
4.10E-05 |
| GO:0000074 |
regulation of cell cycle |
60 |
483 |
8.49E-05 |
| GO:0007243 |
protein kinase cascade |
38 |
283 |
0.001 |
| GO:0043123 |
positive regulation of I-kappaB kinase/NF-kappaB cascade |
17 |
91 |
0.001 |
| GO:0008219 |
cell death |
65 |
595 |
0.004 |
| GO:0005911 |
intercellular junction |
19 |
116 |
0.004 |
| GO:0000165 |
MAPKKK cascade |
16 |
92 |
0.005 |
| GO:0001525 |
angiogenesis |
11 |
53 |
0.02 |
| GO:0007219 |
Notch signaling pathway |
5 |
15 |
0.05 |
Ali-Seyed et al. BMC Cancer 2006 6:54 doi:10.1186/1471-2407-6-54 |
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