Table 2

Correlation analysis of genomic profiles of spiked cells isolated from blood via IE/FACS.

Cell Line

Source

Input for WGA

No. of replicates

Correlation with positive control

S.D.


LNCaP

IE/FACS

20 cells

2

0.63

0.15

Cell culture

50 ng

1

0.82

n.a.

PC3

IE/FACS

20 cells

2

0.88

0.03

Cell culture

50 ng

1

0.97

n.a.

VCaP

IE/FACS

20 cells

2

0.82

0.02

Cell culture

50 ng

1

0.89

n.a.


Isolated 20 tumor cells (in duplicate) and genomic DNA (50 ng) from cell culture were subjected to WGA and aCGH analysis and compared to positive control: unamplified genomic DNA (600 ng) from cell culture

Magbanua et al. BMC Cancer 2012 12:78   doi:10.1186/1471-2407-12-78

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