Table 3

Genes Expressed significantly higher in stromal cell samples

Probe ID

Gene Symbol

Description

Bayes p-value

Fold Change


205242_at

CXCL13

chemokine (C-X-C motif) ligand 13 (B-cell chemoattractant)

2.3E-07

200.7

202274_at

ACTG2

actin, gamma 2, smooth muscle, enteric

9.8E-07

11.9

203903_s_at

HEPH

hephaestin

1.4E-06

12.9

205132_at

ACTC

actin, alpha, cardiac muscle

1.7E-06

26.1

204655_at

CCL5

chemokine (C-C motif) ligand 5

2E-06

24.8

203413_at

NELL2

NEL-like 2 (chicken)

2.1E-06

20.1

1405_i_at

CCL5

chemokine (C-C motif) ligand 5

2.3E-06

21.8

222043_at

CLU

clusterin

2.4E-06

19.5

217764_s_at

RAB31

RAB31, member RAS oncogene family

3.5E-06

13.7

202565_s_at

SVIL

supervillin

3.8E-06

11.6

212865_s_at

COL14A1

collagen, type XIV, alpha 1 (undulin)

4.3E-06

18.0

206030_at

ASPA

aspartoacylase (aminoacylase 2, Canavan disease)

5E-06

53.5

204400_at

EFS

embryonal Fyn-associated substrate

5.2E-06

8.7

204939_s_at

PLN

phospholamban

5.2E-06

14.7

205382_s_at

DF

D component of complement (adipsin)

5.7E-06

10.3

209480_at

HLA-DQB1

major histocompatibility complex, class II, DQ beta 1

5.9E-06

22.8

201058_s_at

MYL9

myosin, light polypeptide 9, regulatory

6.5E-06

14.3

202555_s_at

MYLK

myosin, light polypeptide kinase

6.6E-06

23.6

213994_s_at

SPON1

spondin 1, extracellular matrix protein

6.9E-06

16.5

209541_at

IGF1

insulin-like growth factor 1

7.4E-06

20.9

212764_at

TCF8

transcription factor 8

7.4E-06

8.6

201105_at

LGALS1

lectin, galactoside-binding, soluble, 1 (galectin 1)

8.1E-06

9.1

205743_at

STAC

src homology three (SH3) and cysteine rich domain

9.5E-06

16.5

200897_s_at

KIAA0992

palladin

1.1E-05

7.0

201438_at

COL6A3

collagen, type VI, alpha 3

1.2E-05

7.1

205549_at

PCP4

Purkinje cell protein 4

1.2E-05

6.7

209210_s_at

PLEKHC1

pleckstrin homology domain containing, family C (with FERM domain) member 1

1.2E-05

9.5

221667_s_at

HSPB8

heat shock 27 kDa protein 8

1.3E-05

17.0

205475_at

SCRG1

scrapie responsive protein 1

1.3E-05

14.8

201540_at

FHL1

four and a half LIM domains 1

1.4E-05

11.0

214044_at

RYR2

ryanodine receptor 2 (cardiac)

1.4E-05

22.0

218087_s_at

SORBS1

sorbin and SH3 domain containing 1

1.4E-05

7.1

204083_s_at

TPM2

tropomyosin 2 (beta)

1.5E-05

11.3

218332_at

BEX1

brain expressed, X-linked 1

1.6E-05

11.9

204464_s_at

EDNRA

endothelin receptor type A

1.7E-05

7.2

204069_at

MEIS1

Meis1, myeloid ecotropic viral integration site 1 homolog (mouse)

1.7E-05

11.8


a Probe Set ID is the identification number from the Affymetrix chip.

b. Posterior probability of differential expression > 0.99).

Gregg et al. BMC Cancer 2010 10:165   doi:10.1186/1471-2407-10-165

Open Data