Table 3

NR1I2 and NR1I3 genetic variants in 32 HIV/AIDS patients following targeted sequencing of the NR1I2 and NR1I3 DNA binding domains
SNP ID Location/Functional effect Minor allele Minor allele n (freq)
NR1I2 rs12721601T>C Previously reported, Intron 1 C 1 (0.016)
NR1I2 rs59371185G>A Previously reported, Exon 2, Glu18Lys A 1 (0.016)
NR1I2 rs12721613C>T Previously reported, Exon 2, Pro27Ser T 4 (0.064)
NR1I2 rs1464603C>T Previously reported, Intron 2, Disrupts HNF1 TFB site T 1 (0.016)
NR1I2 rs1464602C>T Previously reported, Intron 2 T 20 (0.313)
NR1I2 rs80320762G>A Previously reported, Intron 2 A 3 (0.048)
NR1I2 rs12721616C>T Previously reported, Intron 2 T 14 (0.219)
NR1I2 rs112813596G>A Previously reported, Intron 3 A 1 (0.016)
NR1I3 rs35205211C>G Previously reported, Exon 4, Ala86Ala G 2 (0.032)
NR1I3 rs34161743C>T Previously reported, Exon 4, Arg97Trp T 1 (0.016)
NR1I2 36726T>C Novel, Intron 1 C 5 (0.078)
NR1I2 36857G>A* Novel, Exon 2 A 1 (0.016)
NR1I2 36905C>T Novel, Exon 2 T 2 (0.031)

Position is noted according to the NR1I2 gene sequence [GenBank: AF364606], *Allele change according to the reverse sequence.

Swart et al.

Swart et al. BMC Medical Genetics 2012 13:112   doi:10.1186/1471-2350-13-112

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