Table 3

Overlap between microarray results

Treatment

Up-regulated

Down-regulated


Abiotic stresses

Ozone

20

5

Oxidative

0

3

UV-A

1

1

UV-B

3

1

White light

3

2

Low nitrate

8

13

Cold

8

8

Drought

7

0

Heat

14

14

Wounding

11

0

Hormones

IAA

2

3

GA3

3

1

Zeatin

2

2

ABA

10

2

Brassinolide

4

2

Salicylic Acid

4

10

Ethylene

4

4

Methyl jasmonate

17

4


The fraction (in %) of genes most significantly up- or downregulated in npq4 vs. wild-type Arabidopsis plants that show over-lap with different abiotic stresses and hormone treatments effects on gene expression. The data was compiled by comparing results from our study with other published studies using Genevestigator (see methods for details).

Frenkel et al. BMC Plant Biology 2009 9:12   doi:10.1186/1471-2229-9-12

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