BMC Plant Biology

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Gene expression profiling in susceptible interaction of grapevine with its fungal pathogen Eutypa lata: Extending MapMan ontology for grapevine

Ana Rotter1*, Céline Camps2, Marc Lohse3, Christian Kappel2, Stefania Pilati4, Matjaž Hren1, Mark Stitt3, Pierre Coutos-Thévenot5, Claudio Moser4, Björn Usadel3*, Serge Delrot2 and Kristina Gruden1

Author Affiliations

1 National Institute of Biology, Department of Biotechnology and Systems Biology, Večna pot 111, 1000 Ljubljana, Slovenia

2 Institute of Vine and Wine Sciences (ISVV), University Victor Segalen Bordeaux II, Unite Mixte de Recherches Ecophysiology and Grape Functional Genomics, INRA, 71 Avenue Edouard, Bourlaux 33883, BP 81, Villenave d'Ornon, France

3 Max Planck Institute of Molecular Plant Physiology Am Mühlenberg 1, 14476 Golm, Germany

4 Department of Genetics and Molecular Biology, IASMA Research Center, Via E. Mach 1, 38010 S, Michele a/Adige (TN), Italy

5 Laboratoire de Physiologie et Biochimie Végétales, UMR CNRS 6161, Université de Poitiers, Bâtiment Botanique, 40 Avenue du Recteur Pineau, 86022 Poitiers Cedex, France

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BMC Plant Biology 2009, 9:104 doi:10.1186/1471-2229-9-104

Published: 5 August 2009

Additional files

Additional file 1:

ID, VVGI5id, VVGI5annotation, UniqueOligo, logFC, AveExpr, t, P.value, adj.P.value, B. The data shows all 312 differentially expressed genes as found in the E. lata experiment: their microarray ID, VVGI5 ID and its annotation, unique oligo sequence, M and A values, p-value and Bonferroni-adjusted p-value, t-statistic and B-statistic.

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