Table 3

TCs grouped by putative function

Contig
# ESTs
bp
BlastX annotation
e-value

Cyt. P450

cr.saCl000837:2
122
1528
Q8VZY2_MUSAC – Cytochrome P450-1
0
cr.saCl001988:1
25
1446
Q8VX49_WHEAT – Cytochrome P450 reductase (EC 1.6.2.4)
0
cr.saCl000837:3
17
674
Q8L5Q2_CICAR – Putative cytochrome P450 monooxygenase
2e-27
cr.saCl000414:1
5
752
Q9AVM1_ASPOF – Cytochrome P450
0
cr.saCl000150:1
3
406
Q9ATU9_LOLRI – Putative cytochrome P450
4e-17
cr.saCl000166:1
3
710
Q6EP96_ORYSA – Putative cytochrome P450
9e-16
cr.saCl001887:1
2
248
Q6H516_ORYSA – Putative cytochrome P450
0.0004
cr.saCl000837:1
2
600
Q8VZY2_MUSAC – Cytochrome P450-1
3e-16
cr13_O11
1
360
Q8S7S6_ORYSA – Cytochrome P450-like protein
7e-35
cr21_F05
1
448
Q8S7S6_ORYSA – Cytochrome P450-like protein
1.00053e-42
cr28_M16
1
533
Q6Z0U4_ORYSA – Putative cytochrome P450 reductase
0
cr34_J15
1
509
Q8S7S6_ORYSA – Cytochrome P450-like protein
0

Lipid metabolism

cr.saCl000870:1
94
592
Q6ZX06_ORYSA – Lipid transfer protein
3e-26
cr.saCl001173:1
56
785
Q6H452_ORYSA -Putative monoglyceride lipase
0
cr.saCl000787:1
10
743
Q94GF2_ORYSA – Putative phospholipase
0
cr.saCl001992:1
5
637
Q52RN7_LEOAR – Non-specific lipid transfer protein-like
2e-28
cr.saCl001009:1
5
667
O04439_ALLPO – 3-ketoacyl carrier protein synthase III
0
cr.saCl001749:1
5
635
Q9NCL8_DICDI – Phosphatidylinositol transfer protein 1
5e-30
cr.saCl000344:1
5
704
O49902_NICRU – 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
0
cr.saCl000816:1
2
677
Q6K7T9_ORYSA – Peroxisomal fatty acid beta-oxidation multif. protein
0
cr.saCl000294:1
2
707
Q84Z91_ORYSA – Oxysterol-binding protein-like
0
cr.saCl000741:1
2
734
STAD_ORYSA – Acyl-(acyl-carrier-protein) desaturase, chloroplast precursor
0
cr13_F23
1
350
Q8S459_LYCES – Putative sphingolipid delta 4 desaturase DES-1
0
cr15_P04
1
306
GPX4_MESCR – Probable phospholipid hydroperoxide glutathione peroxidase
5e-16
cr27_P08
1
74
Q5N7U2_ORYSA – Phospholipid/glycerol acyltransferase-like protein
4e-06
cr35_M17
1
437
GPX4_MESCR – Probable phospholipid hydroperoxide glutathione peroxidase
1e-24

Carotenoid metabolism

cr.saCl000944:1
11
645
Q8VXP2_9ASPA – Beta-carotene hydroxylase
4e-17
cr.saCl001432:1
2
602
Q9FZ04_CAPAN – Plastid terminal oxidase
0
cr.saCl001532:1
7
420
GT_CITUN – Limonoid UDP-glucosyltransferase
2e-06
cr.saCl001032:1
2
426
5CD69_9MYRT – Monoterpene glucosyltransferase
2e-08
cr.saCl000627:1
2
611
69UF5_ORYSA – Putative anthocyanin 5-O-glucosyltransferase
0
cr.saCl000468:2
42
1021
Q70SZ8_9ASPA – Carboxyl methyltransferase
0
cr.saCl000468:1
6
767
70SZ8_9ASPA – Carboxyl methyltransferase
0
cr9_J02
1
69
Q9FEC9_LYCES – Plastid quinol oxidase (Plastid terminal oxidase)
1e-05
cr36_B21
1
706
PAP2_ORYSA – Probable plastid-lipid associated protein 2, chloroplast precursor
0
cr.saCl000045
14
746
Q9FKF4_ARATH – Hypothetical protein At5g61670
0

Transcription factors

cr.saCl000348:1
54
955
Q9AVB7_9LILI – LhMyb protein
0
cr.saCl001329:1
36
384
Q4LEZ4_ASPOF – MADS-box transcription factor
1e-29
cr.saCl000348:2
6
669
Q70RD2_GERHY – MYB8 protein
0
cr.saCl000712:1
6
714
Q6Z8N9_ORYSA – Putative AT-hook DNA-binding protein
0
cr.saCl000359:1
5
593
O82115_ORYSA – Zinc finger protein
5e-19
cr.saCl000502:1
3
565
ULT1_ARATH – Protein ULTRAPETALA1
4e-37
cr.saCl000652:1
2
537
Q6ZG02_ORYSA – Putative DNA-binding protein WRKY2
0
cr17_J15
1
567
Q6Q6W8_9ASPA – Agamous MADS-box transcription factor 1a
0
cr26_B12
1
653
Q8LAP4_ARATH – Similar to MYB-related DNA-binding protein
2e-23
cr6_B13
1
312
Q9M7F3_MAIZE – LIM transcription factor homolog
0

D'Agostino et al. BMC Plant Biology 2007 7:53   doi:10.1186/1471-2229-7-53