Table 1

Classification of Cucumis spp. accessions according to their haplotype in EcoTILLING of eIF4Ea

Haplotype

No. of polymorphisms

Exonb/polymorphismc

Amino acid change

Accessionsd


H.0

-e

-

-

Védrantais and other 97 accessions

H.1

1

1/T81-A

Silent

C-087, C-163, C-182, C-707, C-840, C-841, C-842

H.2

1

1/G186-T

Silent

C-012, C-110, C-262, C-732

H.3

2

1/G186-T

Silent

C-035, C-204, C-205, C-492, WMR-29

1/C243-T

Silent

H.4

1

5/T683-A

Leu228-His

C-046, C-178, C-512, PI 161375

H.5

1

5/G690-A

Silent

C-105, C-117, C-759


a Polymorphisms were observed in comparison with the cultivar Védrantais [18].

b Exon harboring the SNPs/c Position of the SNPs are given in reference to the translational start site.

d Accessions are referred to by Estación Experimental "La Mayora" code's.

e A dash indicates that no polymorphisms were identified.

Nieto et al. BMC Plant Biology 2007 7:34   doi:10.1186/1471-2229-7-34

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