|
Arabidopsis (At) and Populus (Pt) Deg protease gene models (S1 family in MEROPS) corresponding to the names given in the Deg phylogenetic tree. |
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| Group |
At name |
At number |
Populus Gene model |
Pt number |
Pt name |
|
|
|||||
| Deg1 |
AtDeg1 |
At3g27925 |
estExt_Genewise1_v1.C_LG_I2430 |
Pt706718 |
PtDeg1 |
| Deg2 |
AtDeg2 |
At2g47940 |
eugene3.00140795 |
Pt572750 |
PtDeg2.1 |
| fgenesh4_pg.C_LG_XIV001476 |
Pt775566 |
PtDeg2.2 |
|||
| Deg5 |
AtDeg5 |
At4g18370 |
fgenesh4_pg.C_LG_XI000444 |
Pt771291 |
PtDeg5.1 |
| fgenesh4_pg.C_scaffold_3341000001 |
Pt792125 |
PtDeg5.2 |
|||
| Deg7 |
AtDeg7 |
At3g03380 |
estExt_fgenesh4_pg.C_LG_II2234 |
Pt816849 |
PtDeg7.1 |
| eugene3.00040664 |
Pt555951 |
PtDeg7.2 |
|||
| estExt_Genewise1_v1.C_LG_IV3539 |
Pt714140 |
PtDeg7.3 |
|||
| Deg8 |
AtDeg8 |
At5g39830 |
gw1.IV.4356.1 |
Pt199267 |
PtDeg8 |
| Deg9 |
AtDeg9 |
At5g40200 |
gw1.XV.1425.1 |
Pt251989 |
PtDeg9.1 |
| estExt_Genewise1_v1.C_LG_XII1032 |
Pt728836 |
PtDeg9.2 |
|||
| Deg10 |
AtDeg3 |
At1g65630 |
|||
| AtDeg4 |
At1g65640 |
||||
| AtDeg6 |
At1g51150 |
||||
| AtDeg13 |
At5g40560 |
||||
| AtDeg12 |
At3g16550 |
||||
| AtDeg11 |
At3g16540 |
||||
| AtDeg10 |
At5g36950 |
gw1.VIII.1400.1 |
Pt430673 |
PtDeg10.1 |
|
| eugene3.00101698 |
Pt567140 |
PtDeg10.2 |
|||
| AtDeg16 |
At5g54745 |
||||
| Deg14 |
AtDeg14 |
At5g27660 |
grail3.0016016001 |
Pt662713 |
PtDeg14.1 |
| grail3.0016016101 |
Pt662714 |
PtDeg14.2 |
|||
| Deg15 |
AtDeg15 |
At1g28320 |
eugene3.00040486 |
Pt555773 |
PtDeg15.1 |
| gw1.124.194.1 |
Pt266544 |
PtDeg15.2 |
|||
| Deg17 |
fgenesh4_pg.C_scaffold_193000050 |
Pt787034 |
PtDeg17.1 |
||
| eugene3.01930055 |
Pt586371 |
PtDeg17.2 |
|||
| eugene3.00180012 |
Pt577788 |
PtDeg17.3 |
|||
García-Lorenzo et al. BMC Plant Biology 2006 6:30 doi:10.1186/1471-2229-6-30 |
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