BMC Plant Biology

official impact factor 4.09

Open Access Research article

Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana

Joann Mudge1, Steven B Cannon1, Peter Kalo2, Giles ED Oldroyd2, Bruce A Roe3, Christopher D Town4 and Nevin D Young1*

Author Affiliations

1 Dept of Plant Pathology, 495 Borlaug Hall, University of Minnesota, St. Paul, MN 55108 USA

2 Dept. of Disease and Stress Biology, John Innes Centre, Norwich Research Park, Colney Norwich, NR4 7UH, UK

3 The Advanced Center for Genome Technology (ACGT), Stephenson Research & Technology Center, University of Oklahoma, Norman OK 73019 USA

4 The Institute for Genomic Research (TIGR), 9712 Medicago Center Drive, Rockville, MN 20850 USA

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BMC Plant Biology 2005, 5:15 doi:10.1186/1471-2229-5-15

Published: 15 August 2005

Additional files

Additional File 1:

Phylogenetic trees of genes in synteny block 1. For soybean and M. truncatula, genes are labeled with their homoeolog name and gene number as in Figure 1. A. thaliana genes are labeled by their standard gene numbers. Other genes represent expressed sequences. Scales are in PAM units.

Format: EPS Size: 4MB Download file

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Additional File 2:

Phylogenetic trees of genes in synteny block 2. For soybean and M. truncatula, genes are labeled with their homoeolog name and gene number as in Figure 2. A. thaliana genes are labeled by their standard gene numbers. Other genes represent expressed sequences. Scales are in PAM units.

Format: EPS Size: 4.9MB Download file

Open Data

Additional File 3:

Gene Annotation Table

Format: XLS Size: 51KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data