Table 5

Frequency of different types of dinucleotide and trinucleotide repeats in the Fragaria unigene set

Motif
Frequency
Percentage Frequency

AT/TA
15
5.58%
AG/GA/CT/TC
65
24.16%
AC/CA/TG/GT
8
2.97%
GC/CG
0
0.00%
AAT/ATA/TAA/ATT/TTA/TAT
2
0.74%
AAG/AGA/GAA/CTT/TTC/TCT
35
13.01%
AAC/ACA/CAA/GTT/TTG/TGT
4
1.49%
ATG/TGA/GAT/CAT/ATC/TCA
6
2.23%
AGT/GTA/TAG/ACT/CTA/TAC
0
0.00%
AGG/GGA/GAG/CCT/CTC/TCC
21
7.81%
AGC/GCA/CAG/GCT/CTG/TGC
10
3.72%
ACG/CGA/GAC/CGT/GTC/TCG
7
2.60%
ACC/CCA/CAC/GGT/GTG/TGG
10
3.72%
GGC/GCG/CGG/GCC/CCG/CGC
7
2.60%

Folta et al. BMC Plant Biology 2005 5:12   doi:10.1186/1471-2229-5-12