|
Homology between the Fragaria × ananassa unigene sequences in public database as inferred through comparisons to Genbank nr, SWISSPROT, Rosaceae ESTs and mapped peach ESTs. |
||||
| nr.pep.11 |
sprot.fas1 |
Rosaceae ESTs2 |
mapped peach ESTs2 |
|
|
|
||||
| database size |
2321663 |
153871 |
227250 |
256 |
| total # sequences |
1304 |
1304 |
1304 |
1304 |
| # sequences with matches |
1105 |
714 |
835 |
22 |
| % sequences with matches |
84.74% |
54.75% |
64.03% |
1.69% |
| # sequences w/o matches |
199 |
590 |
469 |
1282 |
| % sequences w/o matches |
15.26% |
45.25% |
35.97% |
98.31% |
|
1 FASTX3.4 Algorithm with cut-off of < 1e-6 2 BLASTN Algorithm with identity >= 85% and overlap > = 100 | ||||
Folta et al. BMC Plant Biology 2005 5:12 doi:10.1186/1471-2229-5-12 |
||||