Table 2 |
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Results of DNA hybridizations to determine gene copy number and the number of genome equivalents represented in the arrayed BAC library. |
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Gene probe: |
Homologous to following plant genes (e value; % amino acid identity)1: |
Genome copy number: |
Number of positive BAC clones from arrayed library: |
|
|
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|
SmGAI cDNA |
GIBBERELLIC ACID INSENSITIVE (8e-34; 43) |
1 |
14 |
|
SmCYP98 cDNA |
CYTOCHROME P450 98A3 (1e-40; 66) |
2 |
23 |
|
SmOTP |
OXYANION TRANSLOCATION PROTEIN (1e-36; 53) |
2 |
16 |
|
SmSHR |
SHORTROOT (3e-45; 47) |
1 |
7 |
|
SmZNF |
Zn-FINGER PROTEIN (1e-69; 90) |
1 |
7 |
|
SmChlH |
Mg CHELATASE SUBUNIT H (1e-130; 85) |
1 |
8 |
|
SmSNT |
SYNTAXIN (9e-55; 54) |
1 |
12 |
|
S. moellendorffii chloroplast fragment2 |
Contains: Ribosomal protein L22 (2e-33; 56) Ribosomal protein L2 (1e-33; 71) Ribosomal protein S19 (2e-31; 71) |
ND |
207 |
|
S. moellendorffii mitochondrial fragment2 |
Contains NADH DEHYDROGENASE subunit 5 (6e-61; 71) |
ND |
0 |
|
|
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1Gene listed is based on results of blastx using the S. moellendorffii sequence as a query against the NR database and default parameters [24]. 2sequence described is part of a genomic fragment <5 kb that was used as a probe. |
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Wang et al. BMC Plant Biology 2005 5:10 doi:10.1186/1471-2229-5-10 |
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