PARSESNP output for maize DMT102. At top is a map showing the positions of five independent mutations in the TILLed fragment, based on the gene model (red boxes for exons and lines for introns) and block alignments produced by running SIFT with DMT102 as query against SWISS-PROT-Trembl. The table provides information concerning the effect of the mutation and restriction site changes that can be used for genotyping progeny plants. PSSM Difference or SIFT Scores in red indicate that the missense mutation is predicted to damage the protein. PARSESNP also provides sequence maps (not shown).
Till et al. BMC Plant Biology 2004 4:12 doi:10.1186/1471-2229-4-12