Table 1

Proteins up- or downregulated in CCII-expressing potato lines 9.4 and 10.41
Spot# Protein identity 2 NCBI Accession Number 3 Normalized volume 4
Line K Line 9.4 Line 10.4
1 SOUL heme-binding protein gi|53779330 0.41 0.40 0.63
2 EGD2 protein gi|13615277 0.10 0.08 0.04
3 Secretory peroxidase gi|39826310 0.06 0.08 0.30
4 Mitochondrial NAD-dependent malate dehydrogenase gi|21388544 0.03 0.05 0.13
6 Multimeric flavodoxin WrbA gi|537002029 0.02 0.06 0.18
7 Endochitinase 2 precursor gi|1705808 0.12 0.24 1.93
8 230kDa oxygen evolving protein of photosystem II gi|11134035 2.90 2.13 1.58
9 WIN1 (wound-induced inhibitor 1) precursor gi|139698 0.02 0.09
10 Pathogenesis-related protein P2 precursor gi|400851 0.08 0.36
11 WIN1 (wound-induced inhibitor 1) precursor gi|139698 0.08 0.64
13 Short-chain dehydrogenase gi|77403673 0.03 0.22
14 Secretory peroxidase gi|15256590 0.02 0.21
15 Secretory peroxidase gi|15256590 0.10
16 Pathogenesis-related protein P2 gi|19976 0.02 0.10
17 Secretory peroxidase gi|39804357 0.06 0.34
18 1,3ß-glucan glucanhydrolase gi|3192863 0.02 0.26
19 Osmotin 81 gi|30145505 0.03 0.53
20 Endochitinase 2 precursor gi|1705808 0.10 0.10 0.01
21 Aspartic protease inhibitor 9 gi|20137279 0.06 0.08 0.16
22 Pentapeptide repeat protein gi|53782287 0.29 0.20 0.08
23 FBP aldolase Ia gi|39816882 0.17 0.10 0.04

1 2-DE spatial coordinates, MOWSE score, protein sequence coverage, number of matched peptides and matched peptide sequences are given for each protein in Additional file 1.

2 Protein spots 5 and 12 could not be identified based on available MS spectra.

3 All protein spots matched potato (Solanum tuberosum) protein sequences, except Spot 10 and Spot 16 matching tomato (Solanum lycopersicum) sequences.

4 Blanks indicate no detectable protein product.

Munger et al.

Munger et al. BMC Plant Biology 2012 12:198   doi:10.1186/1471-2229-12-198

Open Data