Table 1

Group A FIL-response genesselected for further analysis
Identifiers Fold change detected by microarray Ratio Fold change detected byqRT-PCR
AGI Name and Symbol 4ha 8ha 8h/4h 4ha,b
AT5G04340 C2H2 zinc-finger transcription factor (CZF2) 2.72 13.05 4.80 1.96
AT2G38470 WRKY family transcription factor (WRKY33) 5.61 15.11 2.69 3.09
AT1G56650 MYB75/PAP1 9.78 22.20 2.27 3.35
AT1G06160 Ethylene response factor (ERF59) 8.66 19.05 2.20 8.79
AT3G23550 MATE efflux family protein 14.24 20.02 1.41 22.73
AT5G60450 AUXIN RESPONSE FACTOR 4 (ARF4) 3.64 4.14 1.14 2.74
AT4G36410 Ubiquitin-conjugating enzyme 17 (UBC17) 4.11 4.69 1.14 3.13
AT5G16560 KANADI1 (KAN1) 2.96 3.35 1.13 3.33
AT3G45640 Mitogen-activating protein kinase 3 (MPK3) 2.55 2.80 1.10 2.24
AT3G62150 ATP-BINDING CASSETTE B21 5.35 5.45 1.02 3.15
AT2G28350 AUXIN RESPONSE FACTOR 10 (ARF10) 1.86 1.89 1.02 2.12
AT1G56010 NAC1 3.57 3.16 0.88 1.08c
AT5G22580 Stress responsive A/B Barrel Domain 3.44 2.81 0.82 2.5
AT1G55200 Protein kinase 4.13 3.26 0.79 2.28
AT3G13672 Seven in absentia-like protein 4.06 2.94 0.72 3.97
AT3G13690 Protein kinase 3.17 2.09 0.66 2.30
AT5G07580 Ethylene response factor (ERF5) 3.87 2.29 0.59 2.93
AT2G37630 ASYMMETRIC LEAVES1 (AS1) -d 1.70 - 2.01
AT3G15570 NON-PHOTOTROPIC3 (NPH3) −1.89 −3.49 1.84 −1.80
AT3G23050 IAA7 −1.74 −2.04 1.17 −1.82
AT2G40610 Expansin (Exp8) −3.28 −3.76 1.15 −2.97
AT5G05690 Cytochrome P450 (CPD) −2.21 −1.69 0.76 −1.50
AT1G20190 Expansin (Exp11) −6.17 −4.57 0.74 −3.71

aLength of DEX treatment. bStatistically significant fold change (p<0.05) was calculated using a Student's t-test; cFC is not statistically significant, dGroup B gene.

Bonaccorso et al.

Bonaccorso et al. BMC Plant Biology 2012 12:176   doi:10.1186/1471-2229-12-176

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