Additional file 10.

Figure S5 LD plots for each chromosome in barley. The color of squares illustrate the strength of pairwise r2 values on a black and white scale, where black indicates perfect LD (r2 = 1.00) while white indicates perfect equilibrium (r2 = 0). Failed and monomorphic SNPs as well as SNPs with MAF < 0.05 are not considered.

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Pasam et al. BMC Plant Biology 2012 12:16   doi:10.1186/1471-2229-12-16