Open Access Highly Accessed Research article

The salt-responsive transcriptome of chickpea roots and nodules via deepSuperSAGE

Carlos Molina16*, Mainassara Zaman-Allah3, Faheema Khan14, Nadia Fatnassi5, Ralf Horres1, Björn Rotter2, Diana Steinhauer2, Laurie Amenc3, Jean-Jacques Drevon3, Peter Winter2 and Günter Kahl1

Author Affiliations

1 Molecular BioSciences, Biocenter, Johann Wolfgang Goethe University, Max-von-Laue-Str. 9, D-60439 Frankfurt am Main, Germany

2 GenXPro GmbH, Frankfurt Innovation Center FIZ Biotechnology, Altendörferallee 3, D-60438 Frankfurt am Main, Germany

3 Soil Symbiosis and Environment, INRA, 1 place Viala, 34060 Montpellier-Cedex, France

4 Molecular Ecology Laboratory, Department of Botany, Jamia Hamdard University, New Delhi, India

5 Estación Experimental del Zaidín, CSIC, C/Profesor Albareda, 1, 18008-Granada, Spain

6 Unité de Recherche en Légumineuses, INRA-URLEG, 17 Rue Sully, 21000 Dijon, France

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BMC Plant Biology 2011, 11:31  doi:10.1186/1471-2229-11-31

Published: 14 February 2011

Additional files

Additional file 1:

Main data matrix with UniTags annotations and expression ratios. Sequences of UniTags-homologous chickpea ESTs. Microarray profiles from spotted UniTags

Format: XLSX Size: 6.2MB Download file

Open Data

Additional file 2:

GSR over-representation analysis results. Raw data from each GSR independent analysis including lists of represented genes per GO term

Format: XLSX Size: 231KB Download file

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Additional file 3:

Potential new-uncharacterized transcripts (genes) showing high salt stress induction in chickpea roots and nodules.

Format: XLSX Size: 12KB Download file

Open Data