Table 9 |
|||||||
|
Analysis of tentative nodulation genes from 454 unigenes of common bean |
|||||||
|
unigenes |
matched soybean sequences |
score |
E-value |
454 sequencing reads |
|||
|
|
|||||||
|
leaf |
root |
Pod |
flower |
||||
|
|
|||||||
|
contig34312 |
Glyma01g03470.1/N36a |
440 |
3.00E-124 |
40 |
24 |
26 |
63 |
|
contig34712 |
Glyma01g03470.1/N36a |
181 |
4.00E-46 |
1 |
9 |
12 |
9 |
|
contig04894 |
Glyma02g43860.1 |
499 |
5.00E-142 |
42 |
69 |
35 |
4 |
|
FF0DN3U02HB71T |
Glyma02g43860.1 |
119 |
5.00E-29 |
0 |
1 |
0 |
0 |
|
contig27995 |
Glyma04g00210.1 |
196 |
1.00E-50 |
1 |
4 |
0 |
1 |
|
contig37370 |
Glyma05g250100.1/Nodulin-21 |
116 |
3.00E-27 |
6 |
1 |
1 |
0 |
|
contig06012 |
Glyma07g33070.1/SAN1B |
430 |
2.00E-121 |
61 |
5 |
6 |
2 |
|
contig14749 |
Glyma07g33070.1/SAN1B |
463 |
3.00E-131 |
17 |
1 |
7 |
4 |
|
contig38427 |
Glyma07g33070.1/SAN1B |
607 |
7.00E-175 |
83 |
0 |
13 |
0 |
|
FGQI37402G5N7N |
Glyma07g33070.1/SAN1B |
117 |
1.00E-28 |
0 |
1 |
0 |
0 |
|
contig06610 |
Glyma07g33090.1/SAN1A |
128 |
1.00E-30 |
0 |
25 |
0 |
0 |
|
contig31277 |
Glyma07g33090.1/SAN1A |
409 |
5.00E-115 |
32 |
30 |
15 |
24 |
|
FF0DN3U02F89J3 |
Glyma07g33090.1/SAN1A |
89 |
6.00E-20 |
0 |
1 |
0 |
0 |
|
contig07549 |
Glyma08g05370.1 |
328 |
2.00E-90 |
12 |
29 |
16 |
1 |
|
contig28119 |
Glyma08g05370.1 |
191 |
6.00E-49 |
0 |
8 |
3 |
2 |
|
contig30228 |
Glyma08g05370.1 |
279 |
2.00E-75 |
62 |
22 |
33 |
5 |
|
FF0DN3U02G2ENE |
Glyma08g05370.1 |
117 |
2.00E-28 |
1 |
0 |
0 |
0 |
|
contig14951 |
Glyma08g12650.1/Nodulin-26a |
351 |
1.0E-97 |
102 |
11 |
49 |
20 |
|
contig19563 |
Glyma08g12650.1/Nodulin-26a |
119 |
7.00E-28 |
0 |
3 |
0 |
2 |
|
contig33328 |
Glyma09g33510.1/NORK |
202 |
1.00E-53 |
0 |
56 |
13 |
0 |
|
contig05955 |
Glyma10g06610.1 |
395 |
3.00E-110 |
18 |
3 |
64 |
18 |
|
contig16149 |
Glyma10g06610.1 |
164 |
1.00E-40 |
19 |
1 |
45 |
43 |
|
FFSTDNT01DSPY6 |
Glyma10g06610.1 |
138 |
7.00E-35 |
0 |
1 |
0 |
0 |
|
contig05559 |
Glyma10g23790.1/Nod35 |
584 |
6.00E-168 |
54 |
25 |
13 |
33 |
|
contig35956 |
Glyma10g39450.1/Nodulin-33 |
251 |
7.00E-68 |
109 |
44 |
42 |
6 |
|
contig36020 |
Glyma10g39450.1/Nodulin-33 |
450 |
1.00E-127 |
6 |
27 |
21 |
195 |
|
contig14075 |
Glyma11g06740.1 |
148 |
2.00E-36 |
0 |
3 |
0 |
0 |
|
contig37552 |
Glyma11g09330.1 |
178 |
2.00E-45 |
5 |
0 |
53 |
122 |
|
FF0DN3U01DKJ7W |
Glyma11g09330.2 |
92.4 |
7.00E-21 |
4 |
0 |
0 0 |
|
|
contig29881 |
Glyma12g04390.1/GmNARK |
428 |
3.00E-120 |
24 |
15 |
34 |
4 |
|
contig38136 |
Glyma12g04390.1/GmNARK |
387 |
7.00E-108 |
205 |
193 |
377 |
122 |
|
FGQI37401C0XA9 |
Glyma12g04390.1/GmNARK |
100 |
4.00E-23 |
0 |
0 |
1 |
0 |
|
contig06199 |
Glyma12g05390.1 |
284 |
5.00E-77 |
15 |
2 |
1 |
0 |
|
FFSTDNT01A6UXI |
Glyma12g05390.1 |
111 |
2.00E-26 |
0 |
0 |
1 |
0 |
|
contig11587 |
Glyma12g28860.1 |
143 |
1.00E-34 |
2 |
0 |
1 |
0 |
|
contig33251 |
Glyma13g17420.1/Nod100 |
447 |
5.00E-126 |
8 |
14 |
27 |
58 |
|
contig36251 |
Glyma13g17420.1/Nod100 |
344 |
3.00E-95 |
19 |
10 |
14 |
21 |
|
contig36660 |
Glyma13g17420.1/Nod100 |
358 |
2.00E-99 |
11 |
10 |
27 |
119 |
|
FFSTDNT01BOZRN |
Glyma13g17420.1/Nod100 |
113 |
2.00E-27 |
0 |
1 |
0 |
0 |
|
FFSTDNT02HOGJ9 |
Glyma13g17420.1/Nod100 |
114 |
2.00E-27 |
1 |
0 |
0 |
0 |
|
FGQI37402JLLRK |
Glyma14g01160.1 |
144 |
1.00E-36 |
0 |
0 |
1 |
0 |
|
contig02608 |
Glyma14g23780.1 |
365 |
5.00E-102 |
61 |
54 |
83 |
85 |
|
contig08886 |
Glyma14g23780.1 |
292 |
8.00E-80 |
69 |
1 |
6 |
0 |
|
FF0DN3U02FPA3G |
Glyma14g23780.1 |
142 |
5.00E-36 |
0 |
0 |
1 |
0 |
|
contig28379 |
Glyma14g38170.1 |
380 |
2.00E-106 |
95 |
85 |
73 |
76 |
|
contig33554 |
Glyma14g38170.1 |
338 |
1.00E-93 |
0 |
63 |
40 |
8 |
|
FF0DN3U01BBYR5 |
Glyma14g38170.1 |
112 |
5.00E-27 |
0 |
1 |
0 |
0 |
|
contig18937 |
Glyma15g00620.1 |
113 |
4.00E-26 |
3 |
0 |
0 |
0 |
|
contig01826 |
Glyma15g35070.1 |
170 |
5.00E-43 |
17 |
10 |
17 |
0 |
|
contig05700 |
Glyma15g35070.1 |
202 |
2.00E-52 |
49 |
34 |
35 |
10 |
|
FF0DN3U02GRTQS |
Glyma15g35070.1 |
112 |
9.00E-27 |
0 |
1 |
0 |
0 |
|
contig04872 |
Glyma16g21620.1 |
699 |
0 |
13 |
10 |
26 |
35 |
|
contig10706 |
Glyma16g21620.1 |
229 |
1.00E-60 |
6 |
1 |
0 |
0 |
|
contig28435 |
Glyma16g21620.1 |
182 |
2.00E-46 |
8 |
28 |
29 |
1 |
|
contig06537 |
Glyma17g03340.1 |
144 |
6.00E-36 |
7 |
16 |
14 |
77 |
|
contig29092 |
Glyma17g03340.1 |
220 |
1.00E-58 |
6 |
11 |
3 |
2 |
|
contig01836 |
Glyma17g08110.1/Nod55-2 |
94.4 |
1.00E-20 |
2 |
1 |
0 |
18 |
|
contig06642 |
Glyma17g14220.1 |
397 |
3.00E-111 |
183 |
165 |
374 |
19 |
|
contig08079 |
Glyma17g14220.1 |
315 |
1.00E-86 |
3 |
2 |
4 |
0 |
|
FF0DN3U01DP3JJ |
Glyma17g14220.1 |
108 |
1.00E-25 |
0 |
0 |
1 |
0 |
|
contig04461 |
Glyma17g27490.1 |
415 |
1.00E-116 |
6 |
5 |
19 |
5 |
|
contig34068 |
Glyma18g02230.1/N70 |
324 |
2.00E-89 |
75 |
64 |
19 |
0 |
|
contig36321 |
Glyma18g02230.1/N70 |
318 |
4.00E-92 |
16 |
9 |
16 |
12 |
|
FFSTDNT01DXXI7 |
Glyma18g02230.1/N70 |
99 |
7.00E-23 |
1 |
0 |
0 |
0 |
|
contig34962 |
Glyma18g14750.1 |
197 |
1.00E-93 |
25 |
16 |
55 |
41 |
|
contig08052 |
Glyma19g45310.1 |
333 |
6.00E-92 |
3 |
1 |
1 |
2 |
|
contig12852 |
Glyma19g45310.1 |
495 |
1.00E-140 |
9 |
0 |
5 |
1 |
|
|
|||||||
|
Kalavacharla et al. BMC Plant Biology 2011 11:135 doi:10.1186/1471-2229-11-135 |
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