Table 9

Analysis of tentative nodulation genes from 454 unigenes of common bean

unigenes

matched soybean sequences

score

E-value

454 sequencing reads


leaf

root

Pod

flower


contig34312

Glyma01g03470.1/N36a

440

3.00E-124

40

24

26

63

contig34712

Glyma01g03470.1/N36a

181

4.00E-46

1

9

12

9

contig04894

Glyma02g43860.1

499

5.00E-142

42

69

35

4

FF0DN3U02HB71T

Glyma02g43860.1

119

5.00E-29

0

1

0

0

contig27995

Glyma04g00210.1

196

1.00E-50

1

4

0

1

contig37370

Glyma05g250100.1/Nodulin-21

116

3.00E-27

6

1

1

0

contig06012

Glyma07g33070.1/SAN1B

430

2.00E-121

61

5

6

2

contig14749

Glyma07g33070.1/SAN1B

463

3.00E-131

17

1

7

4

contig38427

Glyma07g33070.1/SAN1B

607

7.00E-175

83

0

13

0

FGQI37402G5N7N

Glyma07g33070.1/SAN1B

117

1.00E-28

0

1

0

0

contig06610

Glyma07g33090.1/SAN1A

128

1.00E-30

0

25

0

0

contig31277

Glyma07g33090.1/SAN1A

409

5.00E-115

32

30

15

24

FF0DN3U02F89J3

Glyma07g33090.1/SAN1A

89

6.00E-20

0

1

0

0

contig07549

Glyma08g05370.1

328

2.00E-90

12

29

16

1

contig28119

Glyma08g05370.1

191

6.00E-49

0

8

3

2

contig30228

Glyma08g05370.1

279

2.00E-75

62

22

33

5

FF0DN3U02G2ENE

Glyma08g05370.1

117

2.00E-28

1

0

0

0

contig14951

Glyma08g12650.1/Nodulin-26a

351

1.0E-97

102

11

49

20

contig19563

Glyma08g12650.1/Nodulin-26a

119

7.00E-28

0

3

0

2

contig33328

Glyma09g33510.1/NORK

202

1.00E-53

0

56

13

0

contig05955

Glyma10g06610.1

395

3.00E-110

18

3

64

18

contig16149

Glyma10g06610.1

164

1.00E-40

19

1

45

43

FFSTDNT01DSPY6

Glyma10g06610.1

138

7.00E-35

0

1

0

0

contig05559

Glyma10g23790.1/Nod35

584

6.00E-168

54

25

13

33

contig35956

Glyma10g39450.1/Nodulin-33

251

7.00E-68

109

44

42

6

contig36020

Glyma10g39450.1/Nodulin-33

450

1.00E-127

6

27

21

195

contig14075

Glyma11g06740.1

148

2.00E-36

0

3

0

0

contig37552

Glyma11g09330.1

178

2.00E-45

5

0

53

122

FF0DN3U01DKJ7W

Glyma11g09330.2

92.4

7.00E-21

4

0

0 0

contig29881

Glyma12g04390.1/GmNARK

428

3.00E-120

24

15

34

4

contig38136

Glyma12g04390.1/GmNARK

387

7.00E-108

205

193

377

122

FGQI37401C0XA9

Glyma12g04390.1/GmNARK

100

4.00E-23

0

0

1

0

contig06199

Glyma12g05390.1

284

5.00E-77

15

2

1

0

FFSTDNT01A6UXI

Glyma12g05390.1

111

2.00E-26

0

0

1

0

contig11587

Glyma12g28860.1

143

1.00E-34

2

0

1

0

contig33251

Glyma13g17420.1/Nod100

447

5.00E-126

8

14

27

58

contig36251

Glyma13g17420.1/Nod100

344

3.00E-95

19

10

14

21

contig36660

Glyma13g17420.1/Nod100

358

2.00E-99

11

10

27

119

FFSTDNT01BOZRN

Glyma13g17420.1/Nod100

113

2.00E-27

0

1

0

0

FFSTDNT02HOGJ9

Glyma13g17420.1/Nod100

114

2.00E-27

1

0

0

0

FGQI37402JLLRK

Glyma14g01160.1

144

1.00E-36

0

0

1

0

contig02608

Glyma14g23780.1

365

5.00E-102

61

54

83

85

contig08886

Glyma14g23780.1

292

8.00E-80

69

1

6

0

FF0DN3U02FPA3G

Glyma14g23780.1

142

5.00E-36

0

0

1

0

contig28379

Glyma14g38170.1

380

2.00E-106

95

85

73

76

contig33554

Glyma14g38170.1

338

1.00E-93

0

63

40

8

FF0DN3U01BBYR5

Glyma14g38170.1

112

5.00E-27

0

1

0

0

contig18937

Glyma15g00620.1

113

4.00E-26

3

0

0

0

contig01826

Glyma15g35070.1

170

5.00E-43

17

10

17

0

contig05700

Glyma15g35070.1

202

2.00E-52

49

34

35

10

FF0DN3U02GRTQS

Glyma15g35070.1

112

9.00E-27

0

1

0

0

contig04872

Glyma16g21620.1

699

0

13

10

26

35

contig10706

Glyma16g21620.1

229

1.00E-60

6

1

0

0

contig28435

Glyma16g21620.1

182

2.00E-46

8

28

29

1

contig06537

Glyma17g03340.1

144

6.00E-36

7

16

14

77

contig29092

Glyma17g03340.1

220

1.00E-58

6

11

3

2

contig01836

Glyma17g08110.1/Nod55-2

94.4

1.00E-20

2

1

0

18

contig06642

Glyma17g14220.1

397

3.00E-111

183

165

374

19

contig08079

Glyma17g14220.1

315

1.00E-86

3

2

4

0

FF0DN3U01DP3JJ

Glyma17g14220.1

108

1.00E-25

0

0

1

0

contig04461

Glyma17g27490.1

415

1.00E-116

6

5

19

5

contig34068

Glyma18g02230.1/N70

324

2.00E-89

75

64

19

0

contig36321

Glyma18g02230.1/N70

318

4.00E-92

16

9

16

12

FFSTDNT01DXXI7

Glyma18g02230.1/N70

99

7.00E-23

1

0

0

0

contig34962

Glyma18g14750.1

197

1.00E-93

25

16

55

41

contig08052

Glyma19g45310.1

333

6.00E-92

3

1

1

2

contig12852

Glyma19g45310.1

495

1.00E-140

9

0

5

1


Kalavacharla et al. BMC Plant Biology 2011 11:135   doi:10.1186/1471-2229-11-135

Open Data