Table 4 |
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|
Differentially regulated stress and defense response genes. |
|||||
|
Probe Set ID |
Putative Annotation |
Fold Change (High N vs. water) |
P-value |
Fold Change (Low N vs. water) |
P-value |
|
|
|||||
|
Les.2287.3.A1_at |
TAS14 peptide dehydrin |
-24.08 |
0.053 |
-40.75 |
0.078 |
|
|
|||||
|
Les.5957.1.S1_at |
lactoylglutathione lyase |
-6.87 |
0.111 |
-17.15 |
0.078 |
|
|
|||||
|
Les.293.1.S1_at |
hydroxyacylglutathione hydrolase |
-4.66 |
0.513 |
-4.44 |
0.078 |
|
|
|||||
|
Les.23.1.S1_at |
glutathione S-transferase |
-4.54 |
0.569 |
-3.07 |
0.078 |
|
|
|||||
|
Les.124.1.S1_at |
glutathione transferase |
-4.38 |
0.044 |
-2.54 |
0.107 |
|
|
|||||
|
Les.5100.1.S1_at |
type I small heat shock protein |
-3.85 |
0.044 |
-2.20 |
0.107 |
|
|
|||||
|
Les.4789.1.S1_at |
pathogenesis-related protein |
-3.47 |
0.062 |
-2.12 |
0.115 |
|
|
|||||
|
Les.5341.1.S1_at |
pathogen responsive alpha-dioxygenase 2 |
-2.76 |
0.098 |
-1.85 |
0.131 |
|
|
|||||
|
Les.1645.1.A1_at |
pathogenesis-related chitin-binding protein |
-2.44 |
0.065 |
-1.74 |
0.133 |
|
|
|||||
|
Les.4004.1.S1_a_at |
pathogenesis related PR5-like protein |
-2.26 |
0.070 |
-1.59 |
0.143 |
|
|
|||||
|
Les.5098.1.S1_at |
early responsive to dehydration 7-like |
-2.20 |
0.064 |
-1.42 |
0.152 |
|
|
|||||
|
LesAffx.47187.1.S1_at |
responsive to dehydration 22-like |
-2.12 |
0.058 |
-1.34 |
0.165 |
|
|
|||||
|
Les.5103.1.S1_at |
pathogenesis-related protein 1 like |
-2.04 |
0.062 |
-1.33 |
0.168 |
|
|
|||||
|
Les.3151.1.S1_at |
universal stress protein |
-1.99 |
0.084 |
-1.33 |
0.168 |
|
|
|||||
|
Les.253.1.S1_at |
pathogenesis related protein 1-like |
-1.95 |
0.044 |
-1.29 |
0.229 |
|
|
|||||
|
Les.4910.1.S1_at |
stress enhanced protein 2-like |
-1.93 |
0.085 |
-1.26 |
0.232 |
|
|
|||||
|
Les.1498.1.S1_at |
dehydration responsive |
-1.87 |
0.096 |
-1.25 |
0.289 |
|
|
|||||
|
Les.208.1.S1_at |
glutathione S-transferase |
-1.72 |
0.062 |
-1.22 |
0.340 |
|
|
|||||
|
Les.2657.1.S1_at |
rare cold inducible protein-like |
-1.70 |
0.095 |
-1.20 |
0.377 |
|
|
|||||
|
Les.3194.1.S1_at |
universal stress protein |
-1.62 |
0.088 |
-1.16 |
0.386 |
|
|
|||||
|
Les.5128.1.S1_at |
responsive to dehydration 22-like |
-1.61 |
0.044 |
-1.14 |
0.454 |
|
|
|||||
|
Les.3276.3.S1_at |
monocysteinic thioredoxin |
-1.56 |
0.093 |
-1.11 |
0.509 |
|
|
|||||
|
Les.252.1.S1_at |
wound-responsive protein-related |
-1.50 |
0.077 |
-1.11 |
0.524 |
|
|
|||||
|
Les.54.1.S1_at |
sulfiredoxin |
1.10 |
0.044 |
-1.10 |
0.537 |
|
|
|||||
|
Les.248.2.A1_at |
glutathione S-transferase |
1.14 |
0.095 |
-1.08 |
0.796 |
|
|
|||||
|
Les.384.1.A1_at |
thaumatin-like pathogenesis-related PR-5 like protein |
1.42 |
0.070 |
-1.07 |
0.850 |
|
|
|||||
|
Les.4307.1.S1_at |
early responsive to dehydration 3-like |
1.47 |
0.053 |
-1.05 |
0.870 |
|
|
|||||
|
Les.1394.1.A1_at |
heat shock factor binding protein 1 |
1.82 |
0.063 |
1.22 |
0.185 |
|
|
|||||
|
Les.3593.1.S1_at |
heat shock protein |
2.13 |
0.044 |
1.45 |
0.204 |
|
|
|||||
|
Les.2409.1.S1_at |
dnaJ related molecular chaperone |
2.30 |
0.050 |
1.57 |
0.537 |
|
|
|||||
|
LesAffx.43379.1.S1_at |
dnaJ homologue 3 |
2.71 |
0.052 |
1.64 |
0.623 |
|
|
|||||
|
LesAffx.71535.1.S1_at |
heat shock protein |
2.81 |
0.077 |
1.72 |
0.639 |
|
|
|||||
|
Les.641.1.S1_at |
dnaJ heat shock protein |
3.01 |
0.067 |
1.95 |
0.746 |
|
|
|||||
|
LesAffx.66226.2.S1_at |
cold-regulated plasma membrane 1 protein |
3.28 |
0.044 |
1.97 |
0.180 |
|
|
|||||
|
Les.5158.1.S1_at |
dehydration response element B1A |
3.36 |
0.092 |
1.99 |
0.218 |
|
|
|||||
|
LesAffx.59336.1.S1_at |
response to desiccation 26-like transcription factor |
3.59 |
0.082 |
2.25 |
0.231 |
|
|
|||||
|
Probe Set ID; Affymetrix identifier for each microarray probeset. Putative Annotation; functional annotation based on tomato protein function or function of Arabidopsis orthologues identified with BLAST searches. Fold Change; linear fold changes (bold values significant at False Discovery Rate (FDR) adjusted P-value < 0.10). |
|||||
|
Ruzicka et al. BMC Plant Biology 2010 10:75 doi:10.1186/1471-2229-10-75 |
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