Table 1

Classification of chilling upregulated transcription factors by family.

TF Family

Number of genes induced only by chilling

Number of genes induced by both chilling and H2O2

% of total genes within family


bZIP

1

10

10.1


WRKY

10

7

16.3


NAC

16

7

14.6


MYB

23

14

17.7


bHLH

17

12

18.5


AP2/ERF

20

11

17.8


*Per cent chilling induced genes relative to genome-wide total for each family based on the most recent annotation of the Nipponbare genome by Gramene and RAP-DB.

Total per family: 109 (bZIP), 111 (WRKY), 157 (NAC), 209 (MYB), 157 (bHLH), 174 (AP2/ERF).

Yun et al. BMC Plant Biology 2010 10:16   doi:10.1186/1471-2229-10-16

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