BMC Pharmacology


Open Access Highly Access Research article

An evaluation of R2 as an inadequate measure for nonlinear models in pharmacological and biochemical research: a Monte Carlo approach

Andrej-Nikolai Spiess1* and Natalie Neumeyer2

Author Affiliations

1 Department of Andrology, University Hospital Hamburg-Eppendorf, Hamburg, Germany

2 Department of Mathematics, University of Hamburg, Hamburg, Germany

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BMC Pharmacology 2010, 10:6 doi:10.1186/1471-2210-10-6

Published: 7 June 2010

Additional files

Additional File 1:

Mathematical derivation and concise discussion of features and pitfalls in the use of R2 in nonlinear regression and description of the simulation setup.

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Additional File 2:

R code used for conducting the simulations. 'pcrsim' of package 'qpcR' is the workhorse function that creates simulated data starting from the fitted value, adding a desired noise structure and testing different sigmoidal models on the perturbed data. 'code' collects the results and summarizes the data as shown in this manuscript. R script file for the R statistical environment.

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