Table 1

TFBS in different mammalian D4ECR1 as identified by AliBaba 2.1.

Species

Putative TFBS in the mammalian D4ECR1 sequences

Human

Sp1, GATA1, C/EBPα, AP2α, D1, MIG1, E1, SRF, Oct1, CoS, NF1, GR, T3Rα, myogenin.

Chimpanzee

Sp1, C/EBPα, D1, E1, SRF, Oct1, CoS, NF1, GR, T3Rα, myogenin.

Rhesus macaque

Sp1, C/EBPα, D1, PU.1, FTz, E1, SRF, Oct1, CoS, NF1, GR, T3Rα.

Rat

Sp1, Oct1, YY1, RAP1, NF1, Oct1, COUP, GR.

Mouse

Sp1, GCN4, Oct1, C/EBPα, GAL4, Zen1, NF1, AP2α, GATA1, AP1, COUP, GR, T3Rα.

Guinea pig

Sp1, GATA1, NFκ, AP2α, Adf1, NF1, HNF1, GR, myogenin.

Dog

Sp1, NF1, CTF, NFκ, C/EBPα.

Tenrec

Sp1, NF1, PU.1, Fra2, C/EBPα, CRE-BP1, USF, NF1, c-Jun, MyoD, AP2α, REV-ErBAα, ER.


Paredes et al. BMC Neuroscience 2011 12:46   doi:10.1186/1471-2202-12-46

Open Data