Table 1

Comparison of E. histolytica, H. sapiens and S. cerevisiae RAD52 epistasis group proteins

Entamoeba histolytica
Homo sapiens
Saccharomyces cerevisiae

Predicted protein
Size (aa)
GeneBank ID
Locus name a
Protein
Accession number b
Size (aa)
e-value
H (%)
I (%)
Protein
Accession number b
Size (aa)
e-value
H (%)
I (%)

EhMRE11
596
XM_651393
EHI_125910
MRE11
P49959
708
3e-49
51
32
MRE11
P32829
692
1e-33
45
26
EhMRE11-like
223
XM_644963
EHI_077650
MRE11
P49959
708
3e-23
51
25
MRE11
P32829
692
2e-20
49
27
EhRAD50
1241
XM_647783
EHI_079960
RAD50
Q92878
1312
2e-44
40
23
RAD50
P12753
1312
2e-43
46
27
EhNBS1
764
XM_647447
EHI_098770
NBS1
Q6IQ31
754
0.0022
40
24
XRS2
P33301
854
e+3
28
17
EhRAD51
367
XM_648984
EHI_031220
RAD51
Q06609
339
e-125
83
71
RAD51
P25454
400
2e-43
78
60
EhRAD51C
284
XM_619126
EHI_122860
RAD51C
Q433502
376
3e-17
51
28
RAD57
P25301
460
e-109
47
27
-
-
-

RAD51B
O15315
350
-
-
-
RAD55
P38953
406
-
-
-
-
-
-

RAD51D
O75771
289
-
-
-
-
-
-
-
-
-
-
-
-

XRCC2
O43543
280
-
-
-
-
-
-
-
-
-
-
-
-

XRCC3
O43542
346
-
-
-
-
-
-

-
-
EhRAD52
243
XM_648599
EHI_188230
RAD52
P43351
418
2e-35
71
48
RAD52
P06778
504
1e-23
57
38
EhRAD54
885
XM_648260
EHI_103840
RAD54
Q92698
747
e-115
58
41
RAD54
P32863
898
e-106
56
37
EhRAD54B
765
XM_645236
EHI_114930
RAD54B
Q9Y620
910
e-130
52
36
RDH54
P32863
920
e-114
55
39
EhRAD59 (EhRAD52/22a)
190
XM_651011
EHI_112840
-
-
-
-
-
-
RAD59
Q12223
238
2e-08
45
25

a E. histolytica Pathema datatabase

b Swiss-Prot/TrEMBL databases

I, identity; H, homology

López-Casamichana et al. BMC Molecular Biology 2008 9:35   doi:10.1186/1471-2199-9-35