Table 1

Riboswitches and small non-coding RNAs in USA300-HOU-MR

Start

Stop

Definition


Riboswitches

1,556,144

1,556,024

FMN riboswitch

1,899,283

1,899,148

FMN riboswitch

1,653,467

1,653,370

GcvT riboswitch

2,272,812

2,272,596

GlmS riboswitch

1,430,494

1,430,669

lysine riboswitch

1,783,037

1,782,862

lysine riboswitch

436,036

436,135

purine riboswitch

893,057

893,160

SAM riboswitch

1,025,974

1,026,102

YybP-YkoY riboswitch

Small ncRNAs

1,736,694

1,736,363

6S RNA

508,051

508,326

bacterial signal recognition particle RNA

1,930,023

1,929,680

noncoding RNA SprA

1,946,423

1,945,949

noncoding RNA SprB

1,959,339

1,958,106

noncoding RNA SprC

1,958,812

1,958,861

noncoding RNA SprC

2,087,533

2,086,851

noncoding RNA SprD

2,088,540

2,089,062

noncoding RNA SprE

2,090,767

2,090,977

noncoding RNA SprF/SprG

1,516,390

1,515,994

ribonuclease P (RNase P)

2,147,378

2,147,086

RNAIII

868,423

868,737

tmRNA SsrA


Highlander et al. BMC Microbiology 2007 7:99   doi:10.1186/1471-2180-7-99

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