Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping
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* Corresponding author: Paul Keim Paul.Keim@nau.edu
- † Equal contributors
BMC Microbiology 2007, 7:23 doi:10.1186/1471-2180-7-23
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Research article
Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer Talima Pearson, Philip Giffard, Stephen Beckstrom-Sternberg, Raymond Auerbach, Heidie Hornstra, Apichai Tuanyok, Erin P Price, Mindy B Glass, Benjamin Leadem, James S Beckstrom-Sternberg, Gerard J Allan, Jeffrey T Foster, David M Wagner, Richard T Okinaka, Siew Sim, Ofori Pearson, Zaining Wu, Jean Chang, Rajinder Kaul, Alex R Hoffmaster, Thomas S Brettin, Richard A Robison, Mark Mayo, Jay E Gee, Patrick Tan, Bart J Currie, Paul Keim BMC Biology 2009, 7:78 (18 November 2009) Despite a high level of lateral gene transfer, the phylogeny of Burkholderia pseudomallei is resolved by SNPs in orthologous shared regions, enabling a wider gene-based analysis to define two populations, ancestral Australian, and South East Asian, separated by the Wallace Line.
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