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nap and lpxA multiplex primers |
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| nap mpx1: |
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| napAL2 |
Flanking |
5' CTT TAG AAG GGC TTT TAG CTC GTG C 3' |
| napAR4 |
Flanking |
5' ATT TCC CTG CAA GAT AAA ATC TGT AGC 3' |
| napBIF |
Internal |
5' AGA AAA GCA AGT TTA GAA AAT GAA AAT AA 3' |
| napBIR |
Internal |
5' GCA TCA CTT TGT GGA ACA TGA CA 3' |
| nap mpx2: |
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| napAIF3 |
Internal |
5' TAG AAC AAA TAA TAT CGA TCC AAA TGC 3' |
| napAIR3 |
Internal |
5' AAA AGT GTA TCA TCT TCG CTA TAA CCC 3' |
| napBL |
Flanking |
5' GGA ATG ATA CAT AGA GGG ATT ATT TTT G 3' |
| napBR |
Flanking |
5' AAT TTC ACC TTT ATC AGT GCC TAT ATA 3' |
| lpxA: |
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| KK2 |
5' CAA TCA TGW GCN ATA TGR CAA TAN GCC 3' |
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| lpxAC. coli |
5' AGA CAA ATA AGA GAG AAT CAG 3' |
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| lpxAC. jejuni |
5' ACA ACT TGG TGA CGA TGT TGT A 3' |
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| Cl0122 |
5' CTT ACC AAA TGT TAA AAT AGG C 3' |
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| lpxAC. upsaliensis |
5' AAG TCG TAT ATT TTC YTA CGC TTG TGT G 3' |
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lpxAC. coli, lpxAC. jejuni and lpxAC. upsaliensis are from Klena et al. [17]. KK2 and Cl0122 are derived from lpxARKK2m and lpxAC. lari, respectively [17]; the Cl0122/KK2 amplicon is 2 bp longer than the respective lpxARKK2m/lpxAC. lari amplicon. | ||
Miller et al. BMC Microbiology 2007 7:11 doi:10.1186/1471-2180-7-11 |
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