Table 1

EV-71 and HEV-A sequences used for sequence analysis and construction of phylogenetic trees.

Abbreviation

Strain

Accession number

Clinical presentation

Reference


UH1 *

UH1/PM/1997

EMBL: AM396587

Fatal

3

SHA89 *

EV71/9/97/SHA89

EMBL: AJ586873

Fatal

21

SHA63 *

EV71/SAR/SHA63

EMBL: AM396588

HFMD

3

SHA66 *

EV71/SAR/SHA66

EMBL: AM396586

HFMD

3

SHA52 *

ENT/PM/SHA52

EMBL: AM396584

HFMD

11

SHA71 *

ENT/PM/SHA71

EMBL: AM396585

HFMD

11

5666

5666/sin/002209

EMBL: AF352027

HFMD

45

5865

5865/sin/000009

EMBL: AF316321

Fatal

45

BrCr

BrCr

Genbank: U22521

Aseptic meningitis

46

MS

MS/7423/87

Genbank: U22522

Aseptic meningitis

46

TW2272

TW/2272/98

EMBL: AF119795

Fatal

47

TW2086

TW/2086/98

EMBL: AF119796

HFMD

47

NCKU9822

NCKU9822

EMBL: AF136379

Fatal

6

176044

1245a/98/tw

EMBL: AF176044

HFMD

48

Tainan5746

Tainan/5746/98

EMBL: AF304457

HFMD

49

Tainan4643

Tainan/4643/98

EMBL: AF304458

Aseptic meningitis

49

Tainan6092

Tainan/6092/98

EMBL: AF304459

HFMD

49

SHZH98

SHZH98

EMBL: AF302996

HFMD

50

SHZH03

SHZH03

EMBL: AY465356

?

51

CV-A2

CV-A2/Fleetwood

EMBL: AY421760

Paralytic illness +

18

CV-A3

CV-A3/Olson

EMBL: AY421761

Meningitis +

18

CV-A4

CV-A4/High Point

EMBL: AY421762

Not known +

18

CV-A5

CV-A5/Swartz

EMBL: AY421763

Poliomyelitis +

18

CV-A6

CV-A6/Gdula

EMBL: AY421764

Meningitis +

18

CV-A7

CV-A7/Parker

EMBL: AY421765

Bulbar poliomyelitis +

18

CV-A8

CV-A8/Donovan

EMBL: AY421766

Sore throat, nuchal rigidity, muscle weakness +

18

CV-A10

CV-A10/Kowalik

EMBL: AY421767

Meningitis +

18

CV-A12

CV-A12/Texas-12

EMBL: AY421768

Flies in polio community +

18

CV-A14

CV-A14/G-14

EMBL: AY421769

None +

18

CV-A16/G10

CV-A16/G-10

Genbank: U05876

HFMD

52

Tainan5079

Tainan/5079/98

EMBL: AF177911

HFMD

49


* EV-71 isolates sequenced in the present study

+ Reference: 2

Yoke-Fun and AbuBakar BMC Microbiology 2006 6:74   doi:10.1186/1471-2180-6-74

Open Data