Comparative genomics of regulation of heavy metal resistance in Eubacteria

doi:10.1186/1471-2180-6-49

BMC Microbiology

Volume 6

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Permina EA
Kazakov AE
Kalinina OV
Gelfand MS

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Research article

Comparative genomics of regulation of heavy metal resistance in Eubacteria

EA Permina¹^* , AE Kazakov²^* , OV Kalinina³ and MS Gelfand²

¹State Research Institute of Genetics and Selection of Industrial Microorganisms, 1st Dorozhnyj proezd, 1, Moscow, 113535, Russia

²Institute for Information Transmission Problems, Russian Academy of Science, Bolshoi Karetny per. 19, Moscow 127994, Russia

³Department of Bioengineering and Bioinformatics, Moscow State University, Laboratory Building B, Vorobiovy Gory 1-73, Moscow 119992, Russia

author email corresponding author email* Contributed equally

BMC Microbiology 2006, 6:49doi:10.1186/1471-2180-6-49


Published:	5 June 2006

Additional files

Additional file 1:

Table of HMR loci structure and regulatory sites. Sheet 1 – the general information about HMR family members. Sheet 2 MerRG- MerR operons and binding sites in Proteobacteria. Sheet 3 MerRG+ – MerR operons and binding sites in Firmicutes. Sheet 4 PbrR operons and binding sites. Sheet 5 CadR operons and binding sites. Sheet 6 HmrR operons and binding sites. Sheet 7 CueR operons and binding sites. Sheet 8 ZntR operons and binding sites.

Format: XLS Size: 350KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 2:

Promoter recognition matrix.

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Additional file 3:

Multiple sequence alignment of the HTH-regions of the CadR and PbrR orthologs.

Format: GIF Size: 10KB Download file

Additional file 4:

Multiple sequence alignment of the HTH-regions of the CueR and HmrR orthologs.

Format: GIF Size: 23KB Download file

Additional file 5:

Multiple sequence alignment of the N-terminal regions of the MerR orthologs from Gram-negative and Gram-positive bacteria.

Format: GIF Size: 33KB Download file

Additional file 6:

Multiple sequence alignment of the C-terminal regions of the MerR orthologs from Gram-negative and Gram-positive bacteria.

Format: GIF Size: 115KB Download file