Table 3

Overview of the theoretical ARDRA profiles of the species that were newly described since the start of the evaluation period (1998), as obtained after computer aided digestion of the published sequences (see also Figures 4,5,6,7).

Species

Source of isolation

Reference

GenBank Accession Numbers

Hhal

Mbol

Rsal

BstUI


M. bohemicum

[34]

AJ277284, U84502

1'

4

1

3

M. botniense

Water

[35]

AF012756

2

4

3

2

M. elephantis

Elephant

[36]

AF010747

3

1

8

3'

M. goodii

Human wounds

[37]

Y12872

10

1

(1)

2'

Y12872a

10

1

2

2'

M. heckeshornense

Lung disease

[38]

AF1174290

1

4

3

4

M. kubicae

[39]

AF133902

10

1

6

1'

M. murale

Walls of childrens daycare centre

[40]

Unpublished

M. septicum

Catheter related bacteraemia

[41]

AF111809

4

1

6

7

M. tuberculosis subsp. caprae

Goats in Spain

[42]

AJ131120

1

1

1

1

M. tusciae

[43]

AF058299

10

1

6

2'

M. wolinskyi

Human wounds

[37]

Y12871, Y12873

10

1

1

2'


a. After resolving the ambiguity (N) present at E. coli position 95 in the Genbank sequence Y12872. An identical base (G) is found at this position in all mycobacteria.

De Baere et al. BMC Microbiology 2002 2:4   doi:10.1186/1471-2180-2-4

Open Data