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Comparative genomics for mycobacterial peptidoglycan remodelling enzymes reveals extensive genetic multiplicity

Edith Erika Machowski, Sibusiso Senzani, Christopher Ealand and Bavesh Davandra Kana*

Author Affiliations

DST/NRF Centre of Excellence for Biomedical TB Research, Faculty of Health Sciences, University of the Witwatersrand, National Health Laboratory Service, P.O. Box 1038, Johannesburg 2000, South Africa

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BMC Microbiology 2014, 14:75  doi:10.1186/1471-2180-14-75

Published: 24 March 2014

Additional files

Additional file 1: Figure S1:

Phylogenetic relationship between Resuscitation Promoting Factors from various mycobacteria. Figure S2. Phylogenetic relationship between Class A penicillin binding proteins (PonA family) from various mycobacteria. Figure S3. Phylogenetic relationship between Class B penicillin binding proteins (Pbp family) from various mycobacteria. Figure S4. Phylogenetic relationship between Class C penicillin binding proteins (DD-carboxypeptidases) from various mycobacteria. Figure S5. Phylogenetic relationship between endopeptidases (Nlp/P60 – domain containing proteins) from various mycobacteria. Figure S6. Phylogenetic relationship between L,D-transpeptidases from various mycobacteria. Figure S7. Phylogenetic relationship between N-acetylmuramoyl-L-alanine from various mycobacteria.

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Additional file 2: Table S1:

Mycobacterial strains included in this study. Table S2. Bioinformatics sites used for analysis.

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