Table 1

Profiles of A. baumannii clinical isolates
ST1 ST profile1: CC2 Isolates no. Hospital3 PFGE types No., isolates carrying No., carbapenem-non-susceptible isolates
gltA- gyrB - gdhB - recA - cpn60- gpi -rpoD
blaOXA-23
17 1-12-12-11-4-10-3 17 2 WC 3, 36 1 0
75 1-3-3-2-2-11-3 92 6 DZ, MY, WC 4, 24, 26, 37, 50, 51 5 4
92 1-3-3-2-2-7-3 92 8 DY, DZ, MY, NC, WC 2, 8, 28, 34, 41, 47, 49, 56 6 6
118 1-3-3-2-2-3-3 92 2 MY 43, 44 2 2
136 1-3-3-2-2-16-3 92 1 WC 57 0 0
138 1-3-3-2-2-50-3 92 3 WC 25, 29, 61 1 1
184 36-31-59-28-4-54-4 S 1 SN 12 0 0
191 1-3-3-2-2-94-3 92 2 WC 33, 45 2 2
208 1-3-3-2-2-97-3 92 13 LS, LZ, MY, WC, YA 20 (2)4, 21, 22, 23, 27, 38, 39, 40, 46, 48, 49, 59 12 12
218 1-3-3-2-2-102-3 92 2 MY 42, 44 2 2
368 1-3-3-2-2-140-3 92 2 MY, WC 24, 60 2 2
381 1-81-3-3-2-2-16-3 92 3 LE, PZ 1, 18 (2)4 3 3
427/40 1-31-12-11-4-25-3 17/216 2 WC 15, 62 2 0
428/33 21-15-2-28-1-52-4 145/33 1 WC 54 0 0
429/
    332
1-34-56-1-4-144-45 S/216 2 MS, WC 5, 14 0 0
430/
    333
1-31-49-10-1-103-4 S/S 1 WC 30 0 0
431/
    334
34-12-68-41-1-104-4 80/34 1 WC 55 0 0
432/34 34-12-68-41-32-104-4 80/34 1 NC 32 0 0
433/2 1-81-3-1-2-16-3 92/2 1 PZ 19 1 1
475/113 18-44-2-28-1-151-71 S/113 1 WC 35 0 0
476/
    341
35-50-42-49-48-157-5 S/S 1 WC 31 0 0
477/268 1-50-56-2-1-152-26 S/216 1 ZG 9 0 0
478/
    339
33-89-40-26-32-91-5 163/S 1 WC 13 0 0
479/
    331
52-39-80-5-1-161-12 S/216 1 WC 58 0 0
480/
    331
1-34-80-28-1-160-45 172/216 1 WC 7 0 0
481/
    340
1-12-67-6-50-159-6 S/243 1 WC 6 0 0
482/
    335
1-90-6-1-36-102-6 S/216 1 NC 17 0 0
483/
    342
24-1-129-11-49-16-26 S/158 1 PZ 52 0 0
484/
    337
1-91-130-1-36-110-72 S/S 1 DZ 16 0 0
485/
    338
33-12-59-11-32-158-5 334/S 1 DY 10 0 0
503/
    336
1-62-80-28-35-164-45 S/216 1 LZ 11 0 0
ND/203 1-34-ND-28-1-165-45 /216 1 WC 53 1 0

1ND, not determined. For new STs (ST427 and above) and the undetermined ST by the pubmlst scheme, STs determined using the Pasteur MLST scheme are shown after the slash “/” with new STs being underlined.

2CC, clonal complex. S, singleton. CCs for STs determined using the Pasteur MLST scheme are shown after the slash “/” . The members of CCs for STs determined using the pubmlst scheme in Table 1 other than CC92 are listed as below. CC17 (n = 6): ST17, ST373, ST427, ST528, ST530, ST554; CC80 (n = 4): ST80, ST360, ST431, ST432; CC145 (n = 11): ST85, ST86, ST144, ST145, ST153, ST158, ST376, ST401, ST428, ST552, ST553; CC163 (n = 8): ST163, ST164, ST165, ST166, ST167, ST458, ST478, ST574; CC172 (n = 3): ST172, ST412, ST480; CC334 (n = 2): ST334, ST485.

3Hospital: DY, Deyang People’s Hospital, Deyang city; DZ, Dazhou Central Hospital, Dazhou city; LE, Leshan People’s Hospital, Leshan city; LS, The First Hospital of Liangshan Prefecture, Xichang city; LZ, Affiliated Hospital of Luzhou Medical College, Luzhou city; MS, Meishan People’s Hospital, Meishan City; MY, Mianyang Central Hospital, Mianyang city; NC, Affiliated Hospital of North Sichuan Medical College, Nanchong city; PZ, Panzhihua Central Hospital, Panzhihua city; SN, Suining Central Hospital, Suining city; WC, West China Hospital of Sichuan University, Chengdu city; YA, Yaan People’s Hospital,Yaan city; ZG, The First Municipal Hospital of Zigong, Zigong city.

4The number in brackets indicates the number of isolates belonging to the same pulsotype. Isolates of the same pulsotype were recovered from different patients in the same hospital.

Wang et al.

Wang et al. BMC Microbiology 2013 13:234   doi:10.1186/1471-2180-13-234

Open Data