Table 2
Comparison of 16S rRNA gene libraries between the OL and CS groups
OL group CS group
Phylotype Clonesa OTU# Nearest Taxon %b Phylotype Clonesa OTU# Nearest Taxon %b
SDMOL10 1 1 P. brevis 89 SDCS52 1 1 P. brevis 90
SDMOL20 1 2 P. brevis 89 SDCS61 1 2 P. brevis 90
SDMOL48 1 3 P. brevis 89 SDCS69 6 3 P. brevis 90
SDMOL69 1 4 P. brevis 89 SDCS71 2 4 P. brevis 90
SDMOL96 10 5 P. brevis 89 SDCS1 3 5 P. brevis 91
SDMOL29 2 6 P. brevis 89 SDCS74 1 6 P. brevis 91
SDMOL33 1 7 P. brevis 90 SDCS80 1 7 P. brevis 91
SDMOL38 1 8 P. brevis 90 SDCS14 1 8 P. brevis 92
SDMOL80 1 9 P. brevis 90 SDCS40 4 9 P. brevis 92
SDMOL91 1 10 P. brevis 90 SDCS49 3 10 P. brevis 92
SDMOL107 1 11 P. brevis 90 SDCS41 5 11 P. brevis 92
SDMOL108 1 12 P. brevis 90 SDCS5 1 12 P. brevis 93
SDMOL115 2 13 P. brevis 90 SDCS8 1 13 P. brevis 93
SDMOL120 2 14 P. brevis 90 SDCS93 6 14 P. brevis 93
SDMOL4 1 15 P. brevis 91 SDCS16 2 15 P. brevis 98
SDMOL27 2 16 P. brevis 91 SDCS85 1 16 P. salivae 90
SDMOL32 1 17 P. brevis 91 SDCS48 2 17 P. salivae 91
SDMOL84 2 18 P. brevis 91 SDCS2 1 18 P. salivae 92
SDMOL92 2 19 P. brevis 91 SDCS90 1 19 P. ruminicola 91
SDMOL17 5 20 P. brevis 92 SDCS98 5 20 P. ruminicola 92
SDMOL55 1 21 P. brevis 92 SDCS53 1 21 P. ruminicola 93
SDMOL68 8 22 P. brevis 92 SDCS54 3 22 P. ruminicola 93
SDMOL110 4 23 P. brevis 92 SDCS78 1 23 P. ruminicola 93
SDMOL70 1 24 B. intestinihominis 86 SDCS37 7 24 P. ruminicola 93
SDMOL5 1 25 P. shahii 86 SDCS44 1 25 P. ruminicola 94
SDMOL21 1 26 P. shahii 88 SDCS47 1 26 P. ruminicola 94
SDMOL71 2 27 P. shahii 89 SDCS94 1 27 P. ruminicola 94
SDMOL18 1 28 P. shahii 90 SDCS11 1 28 P. ruminicola 95
SDMOL30 1 29 P. shahii 90 SDCS9 5 29 P. ruminicola 95
SDMOL75 10 30 P. shahii 90 SDCS87 2 30 Par. clara 88
SDMOL76 1 31 P. shahii 90 SDCS7 1 31 Par. clara 89
SDMOL82 2 32 P. shahii 90 SDCS60 1 32 P. shahii 85
SDMOL88 1 33 P. shahii 90 SDCS76 2 33 P. shahii 85
SDMOL109 1 34 P. shahii 90 SDCS13 1 34 P. shahii 90
SDMOL118 1 35 P. shahii 90 SDCS86 1 35 P. veroralis 91
SDMOL7 1 36 P. bryantii 90 SDCS77 1 36 P. veroralis 92
SDMOL28 1 37 P. copri 87 SDCS104 1 37 P. dentalis 91
SDMOL26 1 38 P. copri 89 SDCS88 1 38 P. albensis 87
SDMOL135 1 39 P. copri 91 SDCS21 1 39 Ros. hominis 90
SDMOL34 1 40 P. salivae 89 SDCS28 1 40 Pab. merdae 84
SDMOL47 2 41 P. salivae 90 SDCS20 8 41 S. dextrinosolvens 97
SDMOL64 3 42 P. salivae 91 SDCS89 1 42 Rum. bromii 90
SDMOL74 3 43 P. salivae 91 SDCS36 1 43 Rum. bromii 95
SDMOL98 5 44 P. salivae 91 SDCS97 1 44 Rum. bromii 95
SDMOL139 3 45 P. salivae 92 SDCS38 1 45 Pab. merdae 84
SDMOL63 1 46 P. veroralis 91 SDCS50 1 46 Pro. acetatigenes 83
SDMOL44 16 47 P. veroralis 92 SDCS83 1 47 A. shahii 85
SDMOL136 16 48 P. veroralis 92 SDCS96 1 48 Sp. acetigenes 84
SDMOL53 1 49 P. albensis 91 SDCS102 1 49 C. aldrichii 86
SDMOL58 2 50 P. stercorea 87 SDCS105 1 50 C. bolteae 91
SDMOL100 1 51 P. multiformis 91
SDMOL117 1 52 P. ruminicola 92
SDMOL143 1 53 P. dentalis 91
SDMOL31 1 54 A. shahii 85
SDMOL37 1 55 A. shahii 88
SDMOL127 1 56 S. dextrinosolvens 97
SDMOL66 1 57 P. brevis 87

P Prevotella, S Succinivibrio, A Alistipes, Par Paraprevotella, Ros Roseburia, Rum Ruminococcus, Sp Sporanaerobacter, C Clostridium, Pab Parabacteroides, Pro Proteiniphilum, B Barnesiella, a number of clones, b sequence indentity, OTU # OTU No.

Li et al.

Li et al. BMC Microbiology 2013 13:151   doi:10.1186/1471-2180-13-151

Open Data