Table 1

STs at the eight loci examined in the C. striatum and C. amycolatum strains studied

Strain

16Sr DNA

ITS1

gyrA

rpoB

hsp65

sodA

ermX

aphA

ST*


2

1

3

2

2

1

1

1

1

1

7

1

3

2

2

1

1

1

1

1

9

1

6

2

2

1

-

1

1

2

11

1

1

3

2

1

1

1

1

3

12

1

1

3

2

1

-

1

1

3

14

1

6

2

2

1

1

1

1

2

15

1

4

3

2

1

-

1

1

4

16

1

4

3

2

1

1

1

1

4

17

1

2

2

2

1

1

1

1

5

18

1

4

3

2

1

-

1

1

4

19

1

1

3

2

1

-

1

1

3

21

1

6

2

2

1

1

1

1

2

23

1

6

2

2

1

1

1

1

2

24

1

2

2

2

1

1

1

-

5

25

1

3

2

2

1

1

1

1

1

26

1

6

2

2

1

1

1

1

2

28

1

7

3

2

1

1

1

1

6

29

1

5

2

2

1

1

1

1

7

30

1

4

3

4

1

1

1

1

8

31

1

6

2

2

1

1

1

1

2

35

1

6

2

2

1

-

1

1

2

36

1

6

2

2

1

1

1

1

2

41

1

6

2

2

1

1

1

1

2

42

1

6

2

2

1

-

1

1

2

43

1

3

2

2

1

-

1

-

1

44

1

4

3

2

1

-

1

1

4

46

1

3

2

2

1

1

1

1

1

47

1

4

3

2

1

1

1

1

4

48

1

2

2

2

1

1

1

-

5

50

1

4

3

2

1

1

1

1

4

51

1

10

4

2

1

-

1

-

9

53

1

2

2

2

1

1

1

1

5

54

1

3

2

2

1

1

1

-

1

55

1

6

2

2

1

1

1

1

2

56

1

1

3

2

1

-

1

1

3

57

1

4

3

2

1

1

1

1

4

58

1

4

3

2

1

1

1

1

4

59

1

4

3

2

1

-

1

1

4

60

1

4

3

2

1

1

1

1

4

61

1

12

3

3

1

1

1

-

10

62

1

7

3

3

1

-

1

1

11

63

-

7

3

3

1

-

1

1

11

64

1

7

3

3

1

1

1

-

11

65

1

7

3

3

1

-

1

-

11

66

1

4

3

4

1

1

1

1

8

67

1

7

3

3

1

1

1

-

11

68

1

7

3

3

1

-

1

-

11

69

1

9

5

4

2

1

1

-

12

70

2

13

7

6

3

2

1

1

13

71

1

11

4

2

1

1

1

1

14

73

1

4

3

4

1

1

1

-

8

74

1

8

3

4

1

-

1

2

15

C. striatum ATCC 6940T

1

17

1

1

1

-

1

-

16

C. amycolatum CCUG 35685T

5

14

3

7

4

-

-

-

17

CCUG 39137

3

15

3

6

3

-

-

2

18

CCUG 44705

4

16

6

5

1

-

-

-

19


* ST number was obtained taking into account only three of the eight loci analyzed (ITS1 region, gyrA, and rpoB genes)

Gomila et al. BMC Microbiology 2012 12:52   doi:10.1186/1471-2180-12-52

Open Data