Table 5

Fold changes of CRISPR associated ORFs1

Feature ID

Annotation

5dNH4 vs 3dNH4

3dN2 vs 3dNH4

3dN2 vs 5dNH4


Francci3_0017

CRISPR-associated helicase Cas3, core

1.31

1.39

1.06*

Francci3_0020

CRISPR-associated protein, CT1975

2.99

1.63

-1.84

Francci3_0021

CRISPR-associated protein, CT1976

2.79

1.42

-1.96

Francci3_0023

CRISPR-associated protein Cas1

1.31

1.57

1.20

Francci3_0024

CRISPR-associated protein, Cas2

1.16

1.31

1.13*

Francci3_3341

CRISPR-associated helicase Cas3, core

1.29

1.35

1.05*

Francci3_3344

CRISPR-associated protein TM1801

1.04*

1.45

1.39

Francci3_3345

CRISPR-associated protein Cas4

1.97

1.36

-1.44

Francci3_3346

CRISPR-associated protein Cas1

1.14

1.29

1.13


1Fold changes calculated as quotients of RPKM values

*Insignificant p value as determined by Kal's ztest.

Negative values indicate a fold reduction of expression in the reference (later) condition.

Bickhart and Benson BMC Microbiology 2011 11:192   doi:10.1186/1471-2180-11-192

Open Data