Table 1

Dataset statistics

5dNH4 (#ORFs/#Readsǂ)

3dNH4 (#ORFs/#Readsǂ)

3dN2 (#ORFs/#Readsǂ)


rRNA/tRNA

65/1,401,120

65/12,799,049

64/13,524,803

mRNA

4,491/1,322,139

4,544/2,813,063

4544/2,945,205

hypothetical

1,355/307,027

1,363/547,196

1,363/634,786

pseudogenes

49/8,882

49/31,566

49/44,989

transposases

135/24,528

137/62,484

137/87,928

phage proteins

26/12564

26/17,292

26/25,218

CRISPRs

9/6,553

9/8,926

9/12,702


ǂ Includes reads that mapped ambiguously. Ambiguous reads were only counted once.

Bickhart and Benson BMC Microbiology 2011 11:192   doi:10.1186/1471-2180-11-192

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