Table 1

DNA substrates.

ssDNA

oML228: 5'-AAG CAC AAT TAC CCA CGC


dsDNA

oML230: 5'-GCC GTG ATC ACC AAT GCA GAT TGA CGA ACC TTT GCC

oML233: 5'-GGC AAA GGT TCG TCA ATC TGC ATT GGT GAT CAC GGC


3' Overhang

oML276: 5'-AAC GTC ATA GAC GAT TAC ATT GCT ACA TGG AGC TGT CTA GAG GAT CCG AC

oML277: 5'-TAG CAA TGT AAT CGT CTA TGA CGT T


Fork 1

oML211: 5'-GTC GGA TCC TCT AGA CAG CTC CAT GAT CAC TGG CAC TGG TAG AAT TCG GC

oML212: 5'-GCC GAA TTC TAC CAG TGC CAG TGA T

oML287: 5'-ACG ATT ACA TTG CTA CAT GGA GCT GTC TAG AGG ATC CGA C

oML288: 5'-TAG CAA TGT AAT CGT


Fork 2


Fork 3

oML213: 5'-ACG TAG GCC GGA AAC AAC GTC ATA GAC GAT TAC ATT GCT ACA TGG AGC TGT CTA GAG GAT CCG AC

oML278: 5'-TAG CAA TGT AAT CGT CTA TGA CGT TGT TTC CGG CCT ACG T


The 3' end of each DNA oligonucleotide is denoted by a half arrow. The asterisk denotes the position of the fluorescein label. Numbers in parentheses denote the number of bases in the oligonucleotide.

Feng et al. BMC Microbiology 2011 11:189   doi:10.1186/1471-2180-11-189

Open Data