Table 1

Comparison of expression folds change obtained by microarray analysis with fold change obtained by qRT-PCR.

Gene name

Affymetrix fold change

qRT-PCR fold change


gseA

13.30 up

27.94 up

nqr2

9.20 up

17.32 up

ytgD

9.05 up

14.07 up

ydaO

5.98 up

12.51 up

pdhA

5.78 up

17.30 up

recA

4.12 up

7.92 up

lplA 2

3.89 up

7.41 up

trpB

3.80 up

11.87 up

incA

3.10 up

18.04 up

fli1

2.25 up

6.80 up

sdhB

22.53 Down

6.8 Down

trxB

31.44 Down

5.19 Down

pyrH

21.54 Down

No change

miaA

33.91 Down

11.74 Down

cysS

19.09 Down

7.03 Down

nrdA

30.06 Down

5.16 Down

pbp3

33.53 Down

9.43 Down

ychF

21.29 Down

No change

yggV

31.84 Down

12.11 Down


Amirshahi et al. BMC Microbiology 2011 11:150   doi:10.1186/1471-2180-11-150

Open Data