Table 4

Number (percentages) of sequences and amplified in each of the most common Basidiomycete groups, from the original subset3 and from the amplification of ITS3-ITS4-B from subset3, allowing no or 3 mismatches.

subset3

ITS3-4B_3mis

ITS3-4B_0mis


Agaricales

361

269 (74.5)

118 (32.7)

Boletales

18

17 (94.4)

15 (83.3)

Cantharellales

33

31 (93.9)

0

Hymenochaetales

10

7 (70)

0

Polyporales

28

8 (28.6)

0

Russulales

97

64 (66.0)

0

Thelephorales

6

4 (66.7)

0

Dacrymycetes

1

0

0

Tremellomycetes

38

13 (34.2)

0

Pucciniomycotina

8

0

0

Ustilaginomycotina

21

0

0

Other categories *

71

21 (29.6)

3 (4.2)


* 'Other categories' represent smaller orders including Agaricomycetidae.

Bellemain et al. BMC Microbiology 2010 10:189   doi:10.1186/1471-2180-10-189

Open Data