Table 1

Prediction performance of selected representative servers in order to correctly predict ~90% of T-cell epitopes

Server

Thr1

TP (binding)

TN (binding)

FP (binding)

FN (binding)

TP (tumor epitopes)

TP (viral epitopes)


BIMAS (A)

2

10

143

0

23

76 (89%)

39 (89%)

MHCP_I (A)

100

31

7

136

2

80 (94%)

40 (91%)

IEDB_SMM (B)

1,000

10

143

0

23

77 (91%)

38 (86%)

NHP_CP (C)

0

31

126

17

2

79 (93%)

40 (91%)

IEDB_ANN (D)

10,000

9

143

0

24

76 (89%)

39 (89%)

MULTI_SVM (D)

5.5

6

141

2

27

79 (93%)

41 (93%)

NETM_ANN (D)

10,000

15

143

0

18

80 (94%)

41 (93%)


Lin et al. BMC Immunology 2008 9:8   doi:10.1186/1471-2172-9-8

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