Database
The Innate Immune Database (IIDB)
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* Corresponding authors: Alan Aderem aderem@systemsbiology.org - Ilya Shmulevich ishmulevich@systemsbiology.org - Hamid Bolouri hbolouri@systemsbiology.org
- † Equal contributors
1 Institute for Systems Biology, 1441 North 34thStreet, Seattle, Washington 98103-8904, USA
2 Institute Curie, 26 rue d'Ulm 75248 Paris cedex 05, France
3 Department of Chemical Engineering, Pohang University of Science and Technology, San 31, Hoja-Dong, Nam-Gu, Pohang, Kyungbuk, 790-784, Republic of Korea
BMC Immunology 2008, 9:7 doi:10.1186/1471-2172-9-7
Published: 5 March 2008Additional files
Additional file 1:
Gene uploading and validation process diagram. When a user uploads genes for annotation via the web interface the requested genes first pass through an extensive verification process. Only positively identified genes are transmitted to the annotation pipeline. At end of the process a notification is sent to the user detailing the status of his/her request.
Format: TIFF Size: 445KB Download file
Additional file 2:
Matrix family mapping schematic. Matrix hits were collapsed into the same group if the start site of the next hit of the family fell within the first half of length of the previous hit of the family. Only the highest scoring matrix of a family was reported. The other matrix hits in the family are displayed as an attribute of the highest scoring matrix. For matrices without other family members, only the highest scoring matrix was reported if the start site of the next identical matrix fell within the first half of the length of the previous matrix. The scores of the other identical matrices are displayed as an attribute of the highest scoring matrix.
Format: PNG Size: 46KB Download file
