Table 3

Overview of protein-protein interaction of bin30 based on Arabidopsis Interactions Viewer program.

Protein 1

Protein 2

Interolog Confidence Value

Interolog Confidence

Pearson Correlation Coefficient

Protein2 Subcellular Localisation

Protein1 Annotation

Protein2 Annotation

Total hits

Protein2 fold change


At3g45640

At4g26070

27

High

0.65

N/A

MAP kinase 3

MAP kinase kinase1

9

At3g45640

At4g29810

9

Medium

0.633

cytosol

MAP kinase 3

MAP kinase kinase2

3

1.02

At3g45640

At5g50260

1

Low

-0.053

N/A

MAP kinase 3

cysteine proteinase

1

At3g01090

At1g09020

287

High

0.822

N/A

SnRK1

Sucrose NonFermenting 4

41

At3g01090

At3g45240

27

High

0.829

N/A

SnRK1

GRIK kinase 1

9

1.17

At3g01090

At5g48630

24

High

0.661

N/A

SnRK1

cyclin family protein

6

2.93

At3g01090

At4g16360

20

High

0.732

N/A

SnRK1

AMP-activated protein kinase

10

1.16

At3g01090

At5g10270

16

High

0.892

N/A

SnRK1

cyclin dependent kinase C 1

4

1.2

At3g01090

At5g63610

16

High

0.726

N/A

SnRK1

HUA ENHANCER 3

4

At3g01090

At1g15780

6

Medium

0.878

N/A

SnRK1

unknown protein

3

1.16

At3g01090

At4g05320

6

Medium

0.74

N/A

SnRK1

polyubiquitin 10

3

1.12

At3g01090

At1g01960

4

Medium

0.829

N/A

SnRK1

G-nucleotide exchange factor

2

At3g01090

At1g09200

4

Medium

0.565

N/A

SnRK1

histone H3

2

1.4

At3g01090

At1g24290

4

Medium

0.694

N/A

SnRK1

AAA-type ATPase protein

2

At3g01090

At3g54610

4

Medium

0.766

nucleus

SnRK1

Histon acetyltransferase 1

2

At3g01090

At4g18880

4

Medium

0.199

nucleus

SnRK1

HS transcription factor A4A

2

At3g01090

At5g21170

3

Medium

0.571

N/A

SnRK1

AMP-activated protein kinase

3

2.17

At3g01090

At1g05570

2

Medium

0.586

PM

SnRK1

callose synthase

2

At3g01090

At1g14400

1

Low

0.831

N/A

SnRK1

ubiquitin carrier protein 1

1

1.15

At3g01090

At1g16030

1

Low

-0.04

plastid

SnRK1

HS protein 70B

1

At3g01090

At1g20970

1

Low

0.744

N/A

SnRK1

adhesin-related

1

At3g01090

At1g35160

1

Low

0.807

NC, cytosol

SnRK1

general regulatory factor 4

1

At3g01090

At1g36160

1

Low

0.747

PM, cytosol

SnRK1

acetyl-CoA carboxylase

1

0.33

At3g01090

At1g50370

1

Low

0.854

N/A

SnRK1

ser/thr protein phosphatase

1

At3g01090

At1g75560

1

Low

0.741

nucleus

SnRK1

zinc knuckle family protein

1

At3g01090

At2g32850

1

Low

0.837

N/A

SnRK1

protein kinase family protein

1

1.24

At3g01090

At2g37840

1

Low

0.71

N/A

SnRK1

protein kinase family protein

1

At3g01090

At2g43790

1

Low

0.665

N/A

SnRK1

ATMPK6

1

0.86

At3g01090

At3g56640

1

Low

0.777

N/A

SnRK1

exocyst complex subunit

1

At3g01090

At4g10310

1

Low

0.385

N/A

SnRK1

sodium ion transporter

1

At3g01090

At4g26070

1

Low

0.297

N/A

SnRK1

MAP kinase kinase 1

1

At3g01090

At4g26840

1

Low

0.72

nucleus

SnRK1

small ubiquitin-like modifier 1

1

0.79

At3g01090

At5g44740

1

Low

0.686

N/A

SnRK1

UMUC-like DNA repair protein

1

At3g01090

At5g53770

1

Low

0.668

N/A

SnRK1

nucleotidyltransferase

1

At1g59580

At4g29810

12

High

0.621

cytosol

MAP kinase 2

ATMKK2

12

1.02

At1g59580

At2g31660

8

Medium

0.521

nucleus

MAP kinase 2

SAD2

8

At1g59580

At2g17700

6

Medium

0.358

N/A

MAP kinase 2

protein kinase

6

0.88

At1g59580

At1g58230

4

Medium

0.57

mitochondria

MAP kinase 2

WD-40 repeat protein

4

At1g59580

At2g35320

4

Medium

0.601

N/A

MAP kinase 2

protein tyrosine phosphatase

4

At1g59580

At4g21820

4

Medium

0.099

N/A

MAP kinase 2

calmodulin-binding protein

4

At1g59580

At5g17690

4

Medium

0.447

nucleus

MAP kinase 2

terminal flower 2

4

At1g59580

At3g58040

2

Medium

0.278

N/A

MAP kinase 2

seven in absentia protein

2

At1g59580

At4g24440

2

Medium

0.345

nucleus

MAP kinase 2

TFIIA-gamma

2

At1g59580

At4g35780

2

Medium

0.657

N/A

MAP kinase 2

protein kinase protein

2

At1g59580

At5g03415

2

Medium

0.269

nucleus

MAP kinase 2

DPB__DPB

2

At1g59580

At1g53570

1

Low

0.685

N/A

MAP kinase 2

MAP kinase kinase kinase 3

1

1.15

At1g59580

At1g59580

1

Low

1

N/A

MAP kinase 2

ATMPK2

1

1.47


Fold change was on Log2 scale.

Yuan et al. BMC Genomics 2008 9(Suppl 2):S6   doi:10.1186/1471-2164-9-S2-S6

Open Data