Table 3 |
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|
Overview of protein-protein interaction of bin30 based on Arabidopsis Interactions Viewer program. |
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|
Protein 1 |
Protein 2 |
Interolog Confidence Value |
Interolog Confidence |
Pearson Correlation Coefficient |
Protein2 Subcellular Localisation |
Protein1 Annotation |
Protein2 Annotation |
Total hits |
Protein2 fold change |
|
|
|||||||||
|
At3g45640 |
At4g26070 |
27 |
High |
0.65 |
N/A |
MAP kinase 3 |
MAP kinase kinase1 |
9 |
|
|
At3g45640 |
At4g29810 |
9 |
Medium |
0.633 |
cytosol |
MAP kinase 3 |
MAP kinase kinase2 |
3 |
1.02 |
|
At3g45640 |
At5g50260 |
1 |
Low |
-0.053 |
N/A |
MAP kinase 3 |
cysteine proteinase |
1 |
|
|
At3g01090 |
At1g09020 |
287 |
High |
0.822 |
N/A |
SnRK1 |
Sucrose NonFermenting 4 |
41 |
|
|
At3g01090 |
At3g45240 |
27 |
High |
0.829 |
N/A |
SnRK1 |
GRIK kinase 1 |
9 |
1.17 |
|
At3g01090 |
At5g48630 |
24 |
High |
0.661 |
N/A |
SnRK1 |
cyclin family protein |
6 |
2.93 |
|
At3g01090 |
At4g16360 |
20 |
High |
0.732 |
N/A |
SnRK1 |
AMP-activated protein kinase |
10 |
1.16 |
|
At3g01090 |
At5g10270 |
16 |
High |
0.892 |
N/A |
SnRK1 |
cyclin dependent kinase C 1 |
4 |
1.2 |
|
At3g01090 |
At5g63610 |
16 |
High |
0.726 |
N/A |
SnRK1 |
HUA ENHANCER 3 |
4 |
|
|
At3g01090 |
At1g15780 |
6 |
Medium |
0.878 |
N/A |
SnRK1 |
unknown protein |
3 |
1.16 |
|
At3g01090 |
At4g05320 |
6 |
Medium |
0.74 |
N/A |
SnRK1 |
polyubiquitin 10 |
3 |
1.12 |
|
At3g01090 |
At1g01960 |
4 |
Medium |
0.829 |
N/A |
SnRK1 |
G-nucleotide exchange factor |
2 |
|
|
At3g01090 |
At1g09200 |
4 |
Medium |
0.565 |
N/A |
SnRK1 |
histone H3 |
2 |
1.4 |
|
At3g01090 |
At1g24290 |
4 |
Medium |
0.694 |
N/A |
SnRK1 |
AAA-type ATPase protein |
2 |
|
|
At3g01090 |
At3g54610 |
4 |
Medium |
0.766 |
nucleus |
SnRK1 |
Histon acetyltransferase 1 |
2 |
|
|
At3g01090 |
At4g18880 |
4 |
Medium |
0.199 |
nucleus |
SnRK1 |
HS transcription factor A4A |
2 |
|
|
At3g01090 |
At5g21170 |
3 |
Medium |
0.571 |
N/A |
SnRK1 |
AMP-activated protein kinase |
3 |
2.17 |
|
At3g01090 |
At1g05570 |
2 |
Medium |
0.586 |
PM |
SnRK1 |
callose synthase |
2 |
|
|
At3g01090 |
At1g14400 |
1 |
Low |
0.831 |
N/A |
SnRK1 |
ubiquitin carrier protein 1 |
1 |
1.15 |
|
At3g01090 |
At1g16030 |
1 |
Low |
-0.04 |
plastid |
SnRK1 |
HS protein 70B |
1 |
|
|
At3g01090 |
At1g20970 |
1 |
Low |
0.744 |
N/A |
SnRK1 |
adhesin-related |
1 |
|
|
At3g01090 |
At1g35160 |
1 |
Low |
0.807 |
NC, cytosol |
SnRK1 |
general regulatory factor 4 |
1 |
|
|
At3g01090 |
At1g36160 |
1 |
Low |
0.747 |
PM, cytosol |
SnRK1 |
acetyl-CoA carboxylase |
1 |
0.33 |
|
At3g01090 |
At1g50370 |
1 |
Low |
0.854 |
N/A |
SnRK1 |
ser/thr protein phosphatase |
1 |
|
|
At3g01090 |
At1g75560 |
1 |
Low |
0.741 |
nucleus |
SnRK1 |
zinc knuckle family protein |
1 |
|
|
At3g01090 |
At2g32850 |
1 |
Low |
0.837 |
N/A |
SnRK1 |
protein kinase family protein |
1 |
1.24 |
|
At3g01090 |
At2g37840 |
1 |
Low |
0.71 |
N/A |
SnRK1 |
protein kinase family protein |
1 |
|
|
At3g01090 |
At2g43790 |
1 |
Low |
0.665 |
N/A |
SnRK1 |
ATMPK6 |
1 |
0.86 |
|
At3g01090 |
At3g56640 |
1 |
Low |
0.777 |
N/A |
SnRK1 |
exocyst complex subunit |
1 |
|
|
At3g01090 |
At4g10310 |
1 |
Low |
0.385 |
N/A |
SnRK1 |
sodium ion transporter |
1 |
|
|
At3g01090 |
At4g26070 |
1 |
Low |
0.297 |
N/A |
SnRK1 |
MAP kinase kinase 1 |
1 |
|
|
At3g01090 |
At4g26840 |
1 |
Low |
0.72 |
nucleus |
SnRK1 |
small ubiquitin-like modifier 1 |
1 |
0.79 |
|
At3g01090 |
At5g44740 |
1 |
Low |
0.686 |
N/A |
SnRK1 |
UMUC-like DNA repair protein |
1 |
|
|
At3g01090 |
At5g53770 |
1 |
Low |
0.668 |
N/A |
SnRK1 |
nucleotidyltransferase |
1 |
|
|
At1g59580 |
At4g29810 |
12 |
High |
0.621 |
cytosol |
MAP kinase 2 |
ATMKK2 |
12 |
1.02 |
|
At1g59580 |
At2g31660 |
8 |
Medium |
0.521 |
nucleus |
MAP kinase 2 |
SAD2 |
8 |
|
|
At1g59580 |
At2g17700 |
6 |
Medium |
0.358 |
N/A |
MAP kinase 2 |
protein kinase |
6 |
0.88 |
|
At1g59580 |
At1g58230 |
4 |
Medium |
0.57 |
mitochondria |
MAP kinase 2 |
WD-40 repeat protein |
4 |
|
|
At1g59580 |
At2g35320 |
4 |
Medium |
0.601 |
N/A |
MAP kinase 2 |
protein tyrosine phosphatase |
4 |
|
|
At1g59580 |
At4g21820 |
4 |
Medium |
0.099 |
N/A |
MAP kinase 2 |
calmodulin-binding protein |
4 |
|
|
At1g59580 |
At5g17690 |
4 |
Medium |
0.447 |
nucleus |
MAP kinase 2 |
terminal flower 2 |
4 |
|
|
At1g59580 |
At3g58040 |
2 |
Medium |
0.278 |
N/A |
MAP kinase 2 |
seven in absentia protein |
2 |
|
|
At1g59580 |
At4g24440 |
2 |
Medium |
0.345 |
nucleus |
MAP kinase 2 |
TFIIA-gamma |
2 |
|
|
At1g59580 |
At4g35780 |
2 |
Medium |
0.657 |
N/A |
MAP kinase 2 |
protein kinase protein |
2 |
|
|
At1g59580 |
At5g03415 |
2 |
Medium |
0.269 |
nucleus |
MAP kinase 2 |
DPB__DPB |
2 |
|
|
At1g59580 |
At1g53570 |
1 |
Low |
0.685 |
N/A |
MAP kinase 2 |
MAP kinase kinase kinase 3 |
1 |
1.15 |
|
At1g59580 |
At1g59580 |
1 |
Low |
1 |
N/A |
MAP kinase 2 |
ATMPK2 |
1 |
1.47 |
|
|
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|
Fold change was on Log2 scale. |
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|
Yuan et al. BMC Genomics 2008 9(Suppl 2):S6 doi:10.1186/1471-2164-9-S2-S6 |
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