BMC Genomics

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Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata

Jodi A Schwarz, Peter B Brokstein, Christian Voolstra, Astrid Y Terry, David J Miller, Alina M Szmant, Mary A Coffroth and Mónica Medina*

BMC Genomics 2008, 9:97 doi:10.1186/1471-2164-9-97

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BioMed Central: 10 citations

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Production of a reference transcriptome and transcriptomic database (PocilloporaBase) for the cauliflower coral, Pocillopora damicornis

Nikki Traylor-Knowles, Brian R Granger, Tristan J Lubinski, Jignesh R Parikh, Sara Garamszegi, Yu Xia, Jarrod A Marto, Les Kaufman, John R Finnerty BMC Genomics 2011, 12:585 (29 November 2011)

Research article   Open Access

Conjugating effects of symbionts and environmental factors on gene expression in deep-sea hydrothermal vent mussels

Isabelle Boutet, Raymond Ripp, Odile Lecompte, Carole Dossat, Erwan Corre, Arnaud Tanguy, François H Lallier BMC Genomics 2011, 12:530 (28 October 2011)

Research article   Open Access

High amino acid diversity and positive selection at a putative coral immunity gene (tachylectin-2)

Marshall L Hayes, Ron I Eytan, Michael E Hellberg BMC Evolutionary Biology 2010, 10:150 (19 May 2010)

Research article   Open Access

Effects of temperature on gene expression in embryos of the coral Montastraea faveolata

Christian R Voolstra, Julia Schnetzer, Leonid Peshkin, Carly J Randall, Alina M Szmant, Mónica Medina BMC Genomics 2009, 10:627 (23 December 2009)

Research   Open Access

Construction of a high-resolution genetic linkage map and comparative genome analysis for the reef-building coral Acropora millepora

Shi Wang, Lingling Zhang, Eli Meyer, Mikhail V Matz Genome Biology 2009, 10:R126 (10 November 2009)

A high-resolution genetic linkage map for the coral Acropora millepora is constructed and compared with other metazoan genomes, revealing syntenic blocks.

Research article   Open Access Highly Accessed

Comprehensive EST analysis of the symbiotic sea anemone, Anemonia viridis

Cécile Sabourault, Philippe Ganot, Emeline Deleury, Denis Allemand, Paola Furla BMC Genomics 2009, 10:333 (23 July 2009)

Research article   Open Access Highly Accessed

Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont

Shinichi Sunagawa, Emily C Wilson, Michael Thaler, Marc L Smith, Carlo Caruso, John R Pringle, Virginia M Weis, Mónica Medina, Jodi A Schwarz BMC Genomics 2009, 10:258 (5 June 2009)

Research article   Open Access Highly Accessed

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

Eli Meyer, Galina V Aglyamova, Shi Wang, Jade Buchanan-Carter, David Abrego, John K Colbourne, Bette L Willis, Mikhail V Matz BMC Genomics 2009, 10:219 (12 May 2009)

Rapid sequencing of the transcribed genes of coral larvae is made possible by the use of adapted next-generation sequencing methods, revealing around 11,000 expressed genes and candidate genes for the response to temperature stress.

Research article   Open Access Highly Accessed

Microarray analysis identifies candidate genes for key roles in coral development

Lauretta C Grasso, John Maindonald, Stephen Rudd, David C Hayward, Robert Saint, David J Miller, Eldon E Ball BMC Genomics 2008, 9:540 (14 November 2008)

The first large-scale microarray analysis of coral development provides candidate genes for skeletogenesis, metamorphosis and symbiont uptake, and has also uncovered some surprising homologies with higher animals.

Correction   Open Access

Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata

Jodi A Schwarz, Peter B Brokstein, Christian Voolstra, Astrid Y Terry, Chitra F Manohar, David J Miller, Alina M Szmant, Mary Coffroth, Mónica Medina BMC Genomics 2008, 9:435 (23 September 2008)