Table 3

Additional highly scored DosR-binding motifs found in this study

Sequences

ORFs

Locations

Scores


aTtGGGgtgTAAccTCCacA

Rv1737c

-225

8.5

Rv1738

-80

8.5

ggCGcGGACaAAtGgCCCgc

Rv2031c

-106

8.3

Rv2032

-109

8.3

aTtGaGgaccTAagCCCG tt

Rv2623

-128

9.4

gTGGatgacTTTgg tCCCtA

Rv2629

-298

10.0


Lower case characters in sequences show disagreement to the DosR motif consensus TTSGGGACTWWAGTCCCSAA. Locations are the start of the sequences with respect to the translation start site.

Zhang et al. BMC Genomics 2008 9:87   doi:10.1186/1471-2164-9-87

Open Data