Table 1 |
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|
Alignment of promoter regions from sporozoite-expressed genes containing PfM24.1. |
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|
Locus |
Description |
Start |
Sequence |
End |
|
|
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|
MAL13P1.125 |
- |
-312 |
tatatttttttttataaggaCATGCACttaatttttaaaagattttc |
-358 |
|
MAL13P1.212 |
- |
-767 |
ttttaaaatttttcttaaagCATGCACaattaagaagacgaaaaaac |
-813 |
|
MAL8P1.6 |
- |
-55 |
ttttttttttcttagttataCATGCAAaataaataaataagtttata |
-9 |
|
PF08_0088 |
S23 |
-486 |
caaattttttttttctcctgCATGCAGcatttatatattaacttcaa |
-532 |
|
PF08_0088 |
S23 |
-529 |
aagttaatatataaatgctgCATGCAGgagaaaaaaaaaatttgatt |
-483 |
|
PF10_0218 |
citrate synthase |
-936 |
tagctcaaccaaaacataagCATGCAAtatatttttatacttttata |
-890 |
|
PF10_0231 |
- |
-427 |
tttaaatcttcataccaacaCATGCACaaaagaaataaaaaattaca |
-381 |
|
PF11_0328 |
- |
-756 |
tatattataaatactctctgCATGCAAtatatatgtatattactcca |
-710 |
|
PF11_0480 |
S22 |
-131 |
ttgtcctatccaaaaattgaCATTCAGagttatagaaaaaaaatata |
-85 |
|
PF11_0486 |
MAEBL |
-828 |
attttcttcatataagaacaCATGCAGatttttattattgtctattt |
-874 |
|
PF13_0201 |
SSP |
-851 |
gaatcagatttattcaaacgCATGCTGttttaaaataaaaaaaaaaa |
-897 |
|
PF14_0074 |
- |
-837 |
atataaagctacaatacaccCATGCATcaacaatatatcctattttg |
-791 |
|
PF14_0074 |
- |
-449 |
tctgttttttttgtcatttaCATGCATtttatggttgtaaaatgaac |
-495 |
|
PF14_0427 |
- |
-414 |
aaaaaaaaaaaatatacataCATGCATacataagtttctatttttca |
-460 |
|
PF14_0427 |
- |
-325 |
aaaattttgtatgtattataCATGCATattattataatatggtttta |
-279 |
|
PF14_0729 |
- |
-521 |
tttgtccatttataaattagCATGCAAtctatgtctgatattaaaca |
-475 |
|
PFA0200w |
TSRP |
-265 |
ataattacatatttggtctaCATGCATatacaagacaatatattgta |
-219 |
|
PFA0205w |
S24 |
-900 |
aatgaacatatattagcttaCATGCAAaaagaaaaaaaatatatatt |
-854 |
|
PFA0380w |
Kinase |
-986 |
ttttttttttttttttgaaaCATGCATtgttttattcttaaaaaata |
-940 |
|
PFB0325c |
SERA |
-691 |
atttatgagctgaattgttaCATGCATtaaaaatggcaatgggaaat |
-737 |
|
PFC0210c |
CSP |
-708 |
tgggattattgtaaatataaCATGCACattttgtataagttccttaa |
-662 |
|
PFC0210c |
CSP |
-606 |
cagaaattattcttatcttaCATGCACatataaaaaaatggattggt |
-560 |
|
PFD0215c |
Pbs36 |
-399 |
gtgagttctacatgccactgCATGCTGatataaaataaattaaaaaa |
-353 |
|
PFD0235c |
S10 |
-471 |
tatctaggcacgtttcatcaCATGCATaaaaaaataaaaaataaaaa |
-517 |
|
PFD0425w |
S17 |
-897 |
gattgttatatttatcgttaCATGCATgtttcctaattttttttttt |
-851 |
|
PFD0425w |
S17 |
-850 |
aaaaaaaaaaaattaggaaaCATGCATgtaacgataaatataacaat |
-896 |
|
PFD0430c |
Ppl1 |
-578 |
ttttttttaaataaatcatgCATGCACatataattatatttttgtct |
-532 |
|
PFE0360c |
s14 |
-915 |
aataacatcttgtattgtcaCATGCAAaatgaaattatcacatttat |
-869 |
|
PFE0565w |
- |
-765 |
tatatcaaaaacgagacatgCATGCAAttcattttgattcaattgtt |
-719 |
|
PFE0950c |
- |
-396 |
tttccattttttttcctgaaCGTGCAGgaatttaaatattattaatt |
-350 |
|
PFL0065w |
- |
-283 |
aaaaaagaaaccataatatgCATGCACatattaataaatatatatat |
-237 |
|
PFL0370w |
- |
-505 |
aactctctttttttatataaCATGCATgttgtagagctgtatataaa |
-459 |
|
PFL0370w |
- |
-458 |
ttttatatacagctctacaaCATGCATgttatataaaaaaagagagt |
-504 |
|
PFL0630w |
- |
-376 |
atatattattaaaatgtgatCATGCAAaaaaaatgaaaaaacattat |
-330 |
|
PFL0800c |
S4 succinate dehydrogenase |
-804 |
tttttttcgctttatttatgCATGCAAataagttgatattcctgaac |
-758 |
|
PFL1770c |
- |
-748 |
ctgatatataataatggggtCATGCAGgtattgaaatacacttaaaa |
-794 |
|
chr1.rRNA-1-28s |
- |
-868 |
aatagtatcggtgtaatttaCATTCAGcattctgatgatttacagta |
-914 |
|
|
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|
Motifs are highlighted in bold. Start and stop locations are relative to start codons. |
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|
Young et al. BMC Genomics 2008 9:70 doi:10.1186/1471-2164-9-70 |
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