Table 4

Selected inverse miRNA-target relation identified

miRNA

Target Genes

Pathways

Identified by

Log fold change miRNA

Log fold change gene


hsa-miR-128a

COL3A1

**Cell Communication, **ECM receptor interaction, Focal adhesion

TargetScan miRanda

-0.32881

1.36067

hsa-miR-128a

YWHAB

Cell cycle

TargetScan miRanda

-0.32881

0.39416

hsa-miR-128b

COL3A1

**Cell Communication, **ECM receptor interaction, Focal adhesion

TargetScan miRanda

-0.32151

1.36067

hsa-miR-128b

YWHAB

Cell cycle

TargetScan miRanda

-0.32151

0.39416

hsa-miR-148a

YWHAB

Cell cycle

TargetScan miRanda

-0.11883

0.39416

hsa-miR-181b

IGF1R

Adherens junction, Focal adhesion, **Long term depression

Argonaute

-0.20269

0.39429

hsa-miR-181b

MMP14

**GnRH signaling pathway

TargetScan miRanda

-0.20269

0.63365

hsa-miR-181b

DUSP6

**MAPK signaling pathway

TargetScan miRanda

-0.20269

0.66781

hsa-miR-181b

GRIK2

**Neuroactive ligand receptor in

TargetScan miRanda

-0.20269

0.54227

hsa-miR-196a

COL3A1

**Cell Communication, **ECM receptor interaction, Focal adhesion

TargetScan miRanda

-0.24597

1.36067

hsa-miR-203

TGFB3

Cell cycle, **MAPK signaling pathway, TGF beta signaling pathway

TargetScan miRanda

-0.26753

0.38630

hsa-miR-20a

YWHAB

Cell cycle

Argonaute

-0.18897

0.39416

hsa-miR-217

RHOA

Adherens junction, Axon guidance, Focal adhesion, Leukocyte transendothelial mig, Regulation of actin cytoskelet, T cell receptor signaling path, TGF beta signaling pathway, Tight junction, Wnt signaling pathway

Argonaute

-0.32869

0.56512

hsa-miR-217

FN1

**Cell Communication, **ECM receptor interaction, Focal adhesion, Regulation of actin cytoskelet

TargetScan miRanda

-0.32869

1.15979

hsa-miR-217

RAP1B

Focal adhesion, Leukocyte transendothelial mig, Long term potentiation, **MAPK signaling pathway

TargetScan miRanda

-0.32869

0.40226

hsa-miR-217

GRIK2

**Neuroactive ligand receptor in

TargetScan miRanda

-0.32869

0.54227

hsa-miR-30a-3p

JUN

B cell receptor signaling path, Focal adhesion, **GnRH signaling pathway, **MAPK signaling pathway, T cell receptor signaling path, Toll like receptor signaling p, Wnt signaling pathway

TargetScan miRanda

-0.18488

0.64628

hsa-miR-31

YWHAB

Cell cycle

Argonaute

-0.33805

0.39416

hsa-miR-448

IGF1R

Adherens junction, Focal adhesion, **Long term depression

TargetScan miRanda

-0.28453

0.39429

hsa-miR-448

GRIK2

**Neuroactive ligand receptor in

TargetScan miRanda

-0.28453

0.54227


Pandey et al. BMC Genomics 2008 9:624   doi:10.1186/1471-2164-9-624

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