Table 1

General features of the A. ferrooxidans ATCC 23270 genome.

Characteristic

Value


Complete genome size, bp

2,982,397

G+C percent (%)

58.77

Total number of CDSs

3,217

Coding density (%)

97.45

No. of rRNA operons (16S-23S-5S)

2

No. of tRNA genes

78

Proteins with known function

2,070

Conserved hypothetical proteins

388

Hypothetical proteins

759


Most represented functional categories

(%)


Cell envelope

7.8

Transport and binding proteins

7.61

Energy metabolism

6.52


Best BLASTP comparisons against complete proteomes

Number of best blast hits


γ-proteobacteria

899

β-proteobacteria

791

α-proteobacteria

271

δ-proteobacteria

103

Cyanobacteria

73

Archaea

41


Valdés et al. BMC Genomics 2008 9:597   doi:10.1186/1471-2164-9-597

Open Data