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PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

Wen-Chi Chang, Tzong-Yi Lee, Hsien-Da Huang*, His-Yuan Huang and Rong-Long Pan*

BMC Genomics 2008, 9:561 doi:10.1186/1471-2164-9-561

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AtPAN: an integrated system for reconstructing transcriptional regulatory networks in Arabidopsis thaliana

Yi-An Chen, Ying-Chi Wen, Wen-Chi Chang BMC Genomics 2012, 13:85 (8 March 2012)

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Proceedings   Open Access

GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group

Tzong-Yi Lee, Wen-Chi Chang, Justin Hsu, Tzu-Hao Chang, Dray-Ming Shien BMC Genomics 2012, 13(Suppl 1):S3 (17 January 2012)

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Research article   Open Access

Isolation and functional characterization of a cotton ubiquitination-related promoter and 5'UTR that drives high levels of expression in root and flower tissues

Antonio AB Viana, Rodrigo R Fragoso, Luciane M Guimarães, Naiara Pontes, Osmundo B Oliveira-Neto, Sinara Artico, Sarah M Nardeli, Marcio Alves-Ferreira, João AN Batista, Maria CM Silva, Maria F Grossi-de-Sa BMC Biotechnology 2011, 11:115 (24 November 2011)

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Research article   Open Access

Constructing gene regulatory networks for long term photosynthetic light acclimation in Arabidopsis thaliana

Cheng-Wei Yao, Ban-Dar Hsu, Bor-Sen Chen BMC Bioinformatics 2011, 12:335 (11 August 2011)

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