BMC Genomics

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Open Access

Distribution of ancestral proto-Actinopterygian chromosome arms within the genomes of 4R-derivative salmonid fishes (Rainbow trout and Atlantic salmon)

Roy G Danzmann, Evelyn A Davidson, Moira M Ferguson, Karim Gharbi, Ben F Koop, Bjorn Hoyheim, Sigbjorn Lien, Krzysztof P Lubieniecki, Hooman K Moghadam, Jay Park, Ruth B Phillips and William S Davidson*

BMC Genomics 2008, 9:557 doi:10.1186/1471-2164-9-557

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BioMed Central: 12 citations

Research article   Open Access

A synthetic rainbow trout linkage map provides new insights into the salmonid whole genome duplication and the conservation of synteny among teleosts

Rene Guyomard, Mekki Boussaha, Francine Krieg, Caroline Hervet, Edwige Quillet BMC Genetics 2012, 13:15 (16 March 2012)

Research article   Open Access

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

Sigbjørn Lien, Lars Gidskehaug, Thomas Moen, Ben J Hayes, Paul R Berg, William S Davidson, Stig W Omholt, Matthew P Kent BMC Genomics 2011, 12:615 (19 December 2011)

Research article   Open Access

Genome evolution in the fish family salmonidae: generation of a brook charr genetic map and comparisons among charrs (Arctic charr and brook charr) with rainbow trout

Evan R Timusk, Moira M Ferguson, Hooman K Moghadam, Joseph D Norman, Chris C Wilson, Roy G Danzmann BMC Genetics 2011, 12:68 (28 July 2011)

Research article   Open Access

Analysis of BAC-end sequences in rainbow trout: Content characterization and assessment of synteny between trout and other fish genomes

Carine Genet, Patrice Dehais, Yniv Palti, Guangtu Gao, Frederick Gavory, Patrick Wincker, Edwige Quillet, Mekki Boussaha BMC Genomics 2011, 12:314 (14 June 2011)

Open letter   Free Highly Accessed

Sequencing the genome of the Atlantic salmon (Salmo salar)

William S Davidson, Ben F Koop, Steven JM Jones, Patricia Iturra, Rodrigo Vidal, Alejandro Maass, Inge Jonassen, Sigbjorn Lien, Stig W Omholt Genome Biology 2010, 11:403 (30 September 2010)

The International Collaboration to Sequence the Atlantic Salmon Genome (ICSASG) will produce a genome sequence that identifies and physically maps all genes in the Atlantic salmon genome and acts as a reference sequence for other salmonids.

Research article   Open Access

Growth-related quantitative trait loci in domestic and wild rainbow trout (Oncorhynchus mykiss)

Brendan F Wringe, Robert H Devlin, Moira M Ferguson, Hooman K Moghadam, Dionne Sakhrani, Roy G Danzmann BMC Genetics 2010, 11:63 (7 July 2010)

Research article   Open Access

Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome

Jong S Leong, Stuart G Jantzen, Kristian R von Schalburg, Glenn A Cooper, Amber M Messmer, Nancy Y Liao, Sarah Munro, Richard Moore, Robert A Holt, Steven JM Jones, William S Davidson, Ben F Koop BMC Genomics 2010, 11:279 (30 April 2010)

Research article   Open Access

A first generation BAC-based physical map of the rainbow trout genome

Yniv Palti, Ming-Cheng Luo, Yuqin Hu, Carine Genet, Frank M You, Roger L Vallejo, Gary H Thorgaard, Paul A Wheeler, Caird E Rexroad BMC Genomics 2009, 10:462 (8 October 2009)

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Assignment of Atlantic salmon (Salmo salar) linkage groups to specific chromosomes: Conservation of large syntenic blocks corresponding to whole chromosome arms in rainbow trout (Oncorhynchus mykiss)

Ruth B Phillips, Kimberly A Keatley, Matthew R Morasch, Abigail B Ventura, Krzysztof P Lubieniecki, Ben F Koop, Roy G Danzmann, William S Davidson BMC Genetics 2009, 10:46 (18 August 2009)

Research article   Open Access

Confirmation and fine-mapping of a major QTL for resistance to infectious pancreatic necrosis in Atlantic salmon (Salmo salar): population-level associations between markers and trait

Thomas Moen, Matthew Baranski, Anna K Sonesson, Sissel Kjøglum BMC Genomics 2009, 10:368 (7 August 2009)

Research article   Open Access

Comparative genomics and evolution of conserved noncoding elements (CNE) in rainbow trout

Hooman K Moghadam, Moira M Ferguson, Roy G Danzmann BMC Genomics 2009, 10:278 (23 June 2009)

Research article   Open Access

Genetic dissection of MHC-associated susceptibility to Lepeophtheirus salmonis in Atlantic salmon

Karim Gharbi, Kevin A Glover, Louise C Stone, Elizabeth S MacDonald, Louise Matthews, Unni Grimholt, Michael J Stear BMC Genetics 2009, 10:20 (27 April 2009)