Systematic sequencing of mRNA from the Antarctic krill (Euphausia superba) and first tissue specific transcriptional signature

doi:10.1186/1471-2164-9-45

BMC Genomics

Volume 9

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De Pittà C
Bertolucci C
Mazzotta GM
Bernante F
Rizzo G
De Nardi B
Pallavicini A
Lanfranchi G
Costa R

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De Pittà C
Bertolucci C
Mazzotta GM
Bernante F
Rizzo G
De Nardi B
Pallavicini A
Lanfranchi G
Costa R
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Research article

Systematic sequencing of mRNA from the Antarctic krill (Euphausia superba) and first tissue specific transcriptional signature

Cristiano De Pittà¹^,2^* , Cristiano Bertolucci³^* , Gabriella M Mazzotta² , Filippo Bernante¹ , Giorgia Rizzo² , Barbara De Nardi⁴ , Alberto Pallavicini⁴ , Gerolamo Lanfranchi¹^,2 and Rodolfo Costa²

¹CRIBI Biotechnology Centre, Università degli Studi di Padova, Via U. Bassi, 58/B, 35121, Padova, Italy

²Dipartimento di Biologia, Università degli Studi di Padova, Via U. Bassi, 58/B, 35121, Padova, Italy

³Dipartimento di Biologia ed Evoluzione, Università degli Studi di Ferrara, Via L. Borsari, 46, 44100 Ferrara, Italy

⁴Dipartimento di Biologia, Università degli Studi di Trieste, P.le Valmaura, 9, 34148 Trieste, Italy

author email corresponding author email* Contributed equally

BMC Genomics 2008, 9:45doi:10.1186/1471-2164-9-45


Published:	28 January 2008

Additional files

Additional file 1:

This table lists 309 non-redundant sequences identifying known E. superba genes or sequences showing significant similarity with genes from arthropods and other species. These transcripts have been grouped into 13 different functional categories.

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Additional file 2:

Quantitative RT-PCR validation. Forward and reverse primer pairs for ten tested transcripts are detailed at the top. Relative expression values resulting from the quantitative real-time PCR are in the middle and related data plots are also reported. For each transcriptional profiling we have associated the EST counting obtained from the cDNA libraries systematic sequencing.

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